Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00454 ATGGCAAACCCAAACCCTCTTCAGCTTTCTGTTCTCAATCAAATAAAGTTGCATCTTTTTGGTGAACTTTCTCCTCTTCCACTTGCTCCCTCCTCCAATCTCATCCAAAACAACTTCTCTTTTTTATGCGAGGAACCATACCCTACTTCCTCTCAATCAAGCTCCCTCGCCACCCAAAACGATTTTTCTTCGGATTTCTTCGACTTTTCAACTACTTCCACAGAAAACCAGTTCCCCATCTTCGAATTCGATTCCAAACCCCAAGTAATTGACCTCCAAACCCCCAAACCCCACGCTCAAACATCGAACTCGGAGTTCACGTTTCCGACCACACAGGACGGTAAGAAACCTCAATCCAATCGAAAACCGTCGCTGCAAATCTCTCTCCCAAAAAAGACGGAGTGGATCCAGTTCGGAGAAAGTGAGGTGGCCGAAACGGTGGCGCAGAAGGCGGCGGAAGAGAAGAAGCACTACAGAGGAGTTCGACAGAGACCGTGGGGGAAGTTCGCGGCGGAGATCCGCGACCCGAACAAGCGCGGCTCCAGAGTGTGGCTCGGGACGTTCGAGACGGCTCTGGAAGCTGCCAAAGCCTACGACAGAGCCGCATTCAGGCTTCGCGGCTCCAAAGCCATCCTCAACTTCCCCCTCGAAGCCGGCGCCGATAACCGGAAACGCCAAAGGGAAGAGGAAGAGCCGGTGCTGGAAGTAGTTAAGAGGGAGAAGGTGGAAGAATCCGACGTTACCCGCATTAGGGATACTCCATTAACGCCGTCTAGCTGGGTTGGCTTCTGGGGTTCTGATGCAAACGAAATCTTCACCGTTCCGCCTCTGTCGCCGTTATCTCCTCATCCGGCGCTGGGTTATCCACAGCTTATGGTTGTGTGA 885 0.5232 MANPNPLQLSVLNQIKLHLFGELSPLPLAPSSNLIQNNFSFLCEEPYPTSSQSSSLATQNDFSSDFFDFSTTSTENQFPIFEFDSKPQVIDLQTPKPHAQTSNSEFTFPTTQDGKKPQSNRKPSLQISLPKKTEWIQFGESEVAETVAQKAAEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFETALEAAKAYDRAAFRLRGSKAILNFPLEAGADNRKRQREEEEPVLEVVKREKVEESDVTRIRDTPLTPSSWVGFWGSDANEIFTVPPLSPLSPHPALGYPQLMVV 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00454 294 Gene3D AP2/ERF domain 156 217 IPR036955 GO:0003700|GO:0006355
Spst2g00454 294 MobiDBLite consensus disorder prediction 95 126 - -
Spst2g00454 294 SMART rav1_2 157 221 IPR001471 GO:0003700|GO:0006355
Spst2g00454 294 Pfam AP2 domain 157 207 IPR001471 GO:0003700|GO:0006355
Spst2g00454 294 SUPERFAMILY DNA-binding domain 157 216 IPR016177 GO:0003677
Spst2g00454 294 PANTHER DNA-BINDING DOMAIN 110 228 IPR044808 GO:0003700|GO:0009873
Spst2g00454 294 ProSiteProfiles AP2/ERF domain profile. 157 215 IPR001471 GO:0003700|GO:0006355
Spst2g00454 294 PRINTS Ethylene responsive element binding protein signature 197 217 IPR001471 GO:0003700|GO:0006355
Spst2g00454 294 PRINTS Ethylene responsive element binding protein signature 158 169 IPR001471 GO:0003700|GO:0006355
Spst2g00454 294 CDD AP2 156 215 IPR001471 GO:0003700|GO:0006355
Spst2g00454 294 FunFam Ethylene-responsive transcription factor 2 156 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00454 Spst-Chr2 3594913 3595797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00454 1 294 AP2-EREBP Transcription Factor Family AT4G17490 44.073 1.48e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst2g00454 AP2 5.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00454 K09286 - gmx:100808173 371.318