Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00441 ATGGAAGAGAAGAAGAAAAACGAAGCCCGAGAGGCAAAGAAGAAGAAAAGGGAGAGTGATACGAAGCAACCAACGTATCGCGGTGTACGCATGCGCCACTGGGGAAAATGGGTTTCAGAAATAAGAGAGCCCAGAAAAAAGTCCAGAATCTGGCTCGGCACTTTTCCCACGCCAGAAATGGCGGCCCGAGCCCACGATGTGGCGGCTCTCACTATCAAAGGCACTTCCGCTTTCCTTAACTTCCCCGAACTAGCCTCACACCTTCCACGCCCGCCCACCACTTCCCCTAAGGATATCCAAGCCGCCGCCGCCGAAGCTGCTGCACTAAATTGCGAGGCCAAGGCCCAAGCCCAAACCCAAACCCATATGAGCTGCTCAATGTACTCCTTGTTAAACGATGGCGATGACGCGTTCTTGGACCTCCCTGATCTTTTAGTTGACTCAAGTCAGAGTGCAGGTGGGTTTCGTTACTCCGCGCCGTGGCTCGTTGCCGGAGCTGAACATCTCGACTCGGCTTTTCGGCTCGATGACCCTCCTTTTCCCTGGAACTCTTCACCTTAA 561 0.5383 MEEKKKNEAREAKKKKRESDTKQPTYRGVRMRHWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALTIKGTSAFLNFPELASHLPRPPTTSPKDIQAAAAEAAALNCEAKAQAQTQTHMSCSMYSLLNDGDDAFLDLPDLLVDSSQSAGGFRYSAPWLVAGAEHLDSAFRLDDPPFPWNSSP 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00441 186 CDD AP2 26 84 IPR001471 GO:0003700|GO:0006355
Spst2g00441 186 FunFam Ethylene-responsive transcription factor 2 24 83 - -
Spst2g00441 186 MobiDBLite consensus disorder prediction 1 27 - -
Spst2g00441 186 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Spst2g00441 186 Pfam AP2 domain 24 74 IPR001471 GO:0003700|GO:0006355
Spst2g00441 186 SUPERFAMILY DNA-binding domain 25 83 IPR016177 GO:0003677
Spst2g00441 186 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
Spst2g00441 186 Coils Coil 2 22 - -
Spst2g00441 186 Gene3D AP2/ERF domain 25 83 IPR036955 GO:0003700|GO:0006355
Spst2g00441 186 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Spst2g00441 186 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700|GO:0006355
Spst2g00441 186 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00441 Spst-Chr2 3515135 3515695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00441 13 180 AP2-EREBP Transcription Factor Family AT2G44940 46.890 3.03e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst2g00441 AP2 1.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00441 - - gmx:100817503 247.284