Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00420 ATGACGCAATTTGCAGGTAAGGTTCACGGATCACTCGCACGTGCCGGAAAAGTCAGAGGCCAAACCCCCAAAGTGGCGAAGCAGGACAAGAAGAAGAAGCCACGTGGACGAGCCCACAAGAGGATGCAGTACAATCGCCGATTCGTCACCGCCGTGGTGGGATTCGGCAAGAAGAGGGGACCCAACTCATCTGAGAACCTTTGTGAAGAAACAGGACAATCCTCTGAACCTGCATTACCAGGTAATTTCTCTGCCTTGAGAATTTTGCGCCTTTATAGGGGGCAAGAATGA 291 0.5155 MTQFAGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENLCEETGQSSEPALPGNFSALRILRLYRGQE 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00420 96 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 5 66 - -
Spst2g00420 96 Pfam Ribosomal protein S30 7 63 IPR006846 GO:0003735|GO:0005840|GO:0006412
Spst2g00420 96 MobiDBLite consensus disorder prediction 65 80 - -
Spst2g00420 96 MobiDBLite consensus disorder prediction 1 43 - -
Spst2g00420 96 MobiDBLite consensus disorder prediction 26 43 - -
Spst2g00420 96 MobiDBLite consensus disorder prediction 55 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00420 Spst-Chr2 3359969 3360635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00420 6 65 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 96.667 1.04e-28 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00420 K02983 - aof:109826770 117.087