Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00415 ATGGCTTCCCTCCCGGTGTCATTGCAAGTAGCACTCGCAGTTTTCACCTGCATATTCCATGCAGCAACAGTGACGTGCACATCCCACCATGACCGTACCTTCAAGACATTCTCTTCCGCCAACGCCTCCAAGAACCACCACTGGGTCGGACCCATCGGTCACCGTAAAATCACTGTTGACATTAACGGCGGTGGCCACTACCAGTCCGTTCAAGACGCCGTTAATGCTGTCCCAGACAACAACAGAAGGAATATCCTCATTCAAATCAACGCAGGGTGCTACAGAGAAAAGGTGGTGGTGCCCGTGACGAAGCCGTACATAACGTTTGAGGGGGCGGGTAAAGAAGTGACGGTGATAGAATGGCATGATCGAGCGAGTGACCCTGGTCCCAGTGGACAGCAACTGCGTACTTACAGAACCGCTTCTGTTACTGTTTTTGCCAGCTATTTTTCTGCCAGAAACATCAGCTTCAAGAACACAGCGCCGGCACCAATGCCAGGGATGCAGGGGTGGCAAGCGGTGGCGTTTCGCATATCGGGCGATAAGGCATACTTCTCCGGCTGCGGCTTCTACGGCGCACAAGACACACTTTGCGACGATGCTGGGAGACATTACTTCAAAGAATGCTACATTGAGGGATCCATCGATTTCATTTTCGGCAATGGCAGGTCCATGTACAAGGATTGCTGGCTACACTCAATAGCAACGAGGTTTGGGTCGATAGCAGCCCACGACAGGGAGCACGAAGAGGAGAAGACAGGGTTTGCATTTGTAAGGTGCAGGGTGACAGGAACAGGTCCTCTGTATGTGGGACGAGCAATGGGACAATACTCCAGAATCGTCTATGCCTACACATATTTTGATGACATTGTTGCACATGGAGGTTGGGATGATTGGGACCATGCTGACAATAAGAACAAGACTGTGTTCTTCGGAGTGTACAAGTGTTGGGGACCAGGAGCAGAGGCTGTACGTGGGGTCTCGTTGGCCCGAGAACTAGATTTCGAAACGGCCCATCCATTTATCAGGAAGAGTTTCGTCAATGGCAGACACTGGATCGCACCATCTGATGCTTAG 1077 0.5144 MASLPVSLQVALAVFTCIFHAATVTCTSHHDRTFKTFSSANASKNHHWVGPIGHRKITVDINGGGHYQSVQDAVNAVPDNNRRNILIQINAGCYREKVVVPVTKPYITFEGAGKEVTVIEWHDRASDPGPSGQQLRTYRTASVTVFASYFSARNISFKNTAPAPMPGMQGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCWLHSIATRFGSIAAHDREHEEEKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYAYTYFDDIVAHGGWDDWDHADNKNKTVFFGVYKCWGPGAEAVRGVSLARELDFETAHPFIRKSFVNGRHWIAPSDA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00415 358 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 51 354 - -
Spst2g00415 358 Gene3D - 53 357 IPR012334 -
Spst2g00415 358 SUPERFAMILY Pectin lyase-like 55 355 IPR011050 -
Spst2g00415 358 ProSitePatterns Pectinesterase signature 2. 211 220 IPR033131 -
Spst2g00415 358 FunFam Pectinesterase 53 355 - -
Spst2g00415 358 Pfam Pectinesterase 57 349 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00415 Spst-Chr2 3294759 3297500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00415 1 358 Carbohydrate Esterase AT5G47500 72.376 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00415 - - gmx:100816190 695.656