Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00387 ATGAAAGTTCATCACTTTCTTTCTCTGCTTATTCTGGTTTCATTTCTCATTCCTCAAATGGCTGTTGGAACTGCGGAGCTTAAAGCTCTGATGGATTTGAAGTCATCTCTGGACCCAGGTGGCAAGATCCTTGCCTCCTGGATCAGTGATGGTGATCCATGCAGTGGTTTCTTCGAAGGGGTTGCGTGCAACGAGAACCAGAAAGTCGCCAACATCTCCTTGCAGGGAAAGGGTCTTTCTGGTTGGCTATCTCCAGCCCTGGCTGAACTCAAATGCTTGACAGGTTTATACTTGCATTATAACAACCTTTCAGGTGAGATACCCCCTCACATTTCAAATCTCACTGATCTGGTTGATCTCTATCTCGACGTGAATAGTTTATCGGGAACTATTCCTCCTGAGCTCGGCAACATGGCTAGTCTCCAAGTGCTGCAGTTGGGAGATAACCAGTTGGTGGGGAATATACCGACACAGATGGGTTCCTTAAAGCAGCTTAGTACTCTTTCTTTGCAATATAACAAGTTAACTGGTCAAATTCCTCTTAGCTTGGGGACTTTAGAGAAGTTAAGAAGGCTAAATTTGAGCTTCAACAACTTTAATGGTACTCTTCCGGCAACACTAGCACATATTGAACATTTGGAAGTTCTAGATATTCAGAACAATTCTTTATCAGGAATTGTTCCTTCGGCATTGAAGAGACTTGGGGAAGGATTTCAAGGTGCAAACAACCCGGGCTTATGTGGAGTTGAGTTTTCTACTTTGAGAGCTTGCAACAAAAATCATGATTTAAACGTTAACCATATTGATAACTTGGATCGAGACCAACCCAAAAGTAGTAATTCTTCAAAGGCTCTCCCAGAGCCTGCAAATGTTCAGTTGCATTGTGACCAAACCCATTGTTCAAAATCACGAAGGTTTCCTCAAGTTTTCGTCACAGCAGGTGTTATAATTGTTAGTCTTACGTTCATATGTGCTGGATTTTTGACATTCTTCAGATACCGCCGACAAAAACAGAGGGTCAGCAATACATCAAGTTCTTCTTCTCAAGGGAAACATAGTCCTGATCAGCCTAAAGAGTTGTATACAAAAAGTCCATCTGCACTTGTTAATATTGAGTATTATAGTGGGTGGGATCATTTGTCCAATGGTCAAAATGCTGATCCCGGTGGGTTATCCAATGATTATCTAAGTCAATTTAGGTTTAACGTGGATGAGGTTGAATCTGCAACACAGTACCTATCGGAAGCCAATTTACTTGGTAAAAGCAAATTCTCAGCAGTTTATAAAGGAATTCTCAGAGATGGTTCTCTCGTGGCTATTAGAAGCATCAGCGTGACATGCTGCAAAACCGAGGAAGCTGAATTTGTAAAGGGGTTGAACTTATTAACCTCTCTGAGACATGAAAACCTTGTTAGGCTGAGAGGATTTTGTTGCTCAAGGAGTCGAGGTGAATGTTTCCTTATCTATGATTTTGCCACCATGGGTAACCTGTCTCAATATCTTGACTTAGAAGATGGAAGTGACCATGTGCTTGAGTGGTCCAAGAGAGTTTCTATCATCAACGGCATTGCAAAGGGTATTGGATATCTACATAGCAATGAAGCAAGCAAACCTACAATAGTTCACCAGAATATTTCAGTGGAAAATGTTCTCCTAGACCATCAGTTTAACCCATTGATCATGGATGCTGGACTACCTAAGCTTCTTGCAGATGATGTTGTTTTCTCAGCTCTTAAAGTGAGTGCAGCAATGGGATACTTAGCTCCCGAATACATTACTACTGGAAGATTTACTGAGAAGAGTGACATATACGCATTTGGAGTTATTATTCTTCAAGTTTTATCTGGCAAGACGACAATAGGTAGTTCAATACGTACAGCAGTTGAATCTTTCAGATTTGACGATTCTGTTGACTCAAACCTTAGGGGAAAGTATTCTAGATCTGAAGCAGCCACGCTTTCAAAGCTTGCAATACAATGTACTCATGAGTTTCCTGACCAAAGACCAACCGTGGTGGATGTGATTCAGGAGTTGAGTGTGTCTTCTGCTCATTTGTAA 2058 0.4135 MKVHHFLSLLILVSFLIPQMAVGTAELKALMDLKSSLDPGGKILASWISDGDPCSGFFEGVACNENQKVANISLQGKGLSGWLSPALAELKCLTGLYLHYNNLSGEIPPHISNLTDLVDLYLDVNSLSGTIPPELGNMASLQVLQLGDNQLVGNIPTQMGSLKQLSTLSLQYNKLTGQIPLSLGTLEKLRRLNLSFNNFNGTLPATLAHIEHLEVLDIQNNSLSGIVPSALKRLGEGFQGANNPGLCGVEFSTLRACNKNHDLNVNHIDNLDRDQPKSSNSSKALPEPANVQLHCDQTHCSKSRRFPQVFVTAGVIIVSLTFICAGFLTFFRYRRQKQRVSNTSSSSSQGKHSPDQPKELYTKSPSALVNIEYYSGWDHLSNGQNADPGGLSNDYLSQFRFNVDEVESATQYLSEANLLGKSKFSAVYKGILRDGSLVAIRSISVTCCKTEEAEFVKGLNLLTSLRHENLVRLRGFCCSRSRGECFLIYDFATMGNLSQYLDLEDGSDHVLEWSKRVSIINGIAKGIGYLHSNEASKPTIVHQNISVENVLLDHQFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIILQVLSGKTTIGSSIRTAVESFRFDDSVDSNLRGKYSRSEAATLSKLAIQCTHEFPDQRPTVVDVIQELSVSSAHL 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00387 685 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Spst2g00387 685 MobiDBLite consensus disorder prediction 341 361 - -
Spst2g00387 685 Gene3D Ribonuclease Inhibitor 173 243 IPR032675 -
Spst2g00387 685 SUPERFAMILY Protein kinase-like (PK-like) 393 679 IPR011009 -
Spst2g00387 685 MobiDBLite consensus disorder prediction 267 287 - -
Spst2g00387 685 Gene3D Transferase(Phosphotransferase) domain 1 494 684 - -
Spst2g00387 685 FunFam Protein NSP-INTERACTING KINASE 2 23 172 - -
Spst2g00387 685 FunFam Protein NSP-INTERACTING KINASE 2 384 491 - -
Spst2g00387 685 Pfam Protein tyrosine and serine/threonine kinase 417 678 IPR001245 GO:0004672|GO:0006468
Spst2g00387 685 Gene3D Ribonuclease Inhibitor 24 172 IPR032675 -
Spst2g00387 685 Pfam Leucine rich repeat 140 199 IPR001611 GO:0005515
Spst2g00387 685 Gene3D Phosphorylase Kinase; domain 1 385 491 - -
Spst2g00387 685 ProSiteProfiles Protein kinase domain profile. 413 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00387 685 SUPERFAMILY L domain-like 26 233 - -
Spst2g00387 685 MobiDBLite consensus disorder prediction 341 355 - -
Spst2g00387 685 FunFam Protein NSP-INTERACTING KINASE 2 492 682 - -
Spst2g00387 685 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 140 680 IPR046959 -
Spst2g00387 685 SMART LRR_typ_2 90 114 IPR003591 -
Spst2g00387 685 SMART LRR_typ_2 186 209 IPR003591 -
Spst2g00387 685 SMART LRR_typ_2 138 162 IPR003591 -
Spst2g00387 685 SMART LRR_typ_2 210 233 IPR003591 -
Spst2g00387 685 Pfam Leucine Rich Repeat 212 234 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00387 Spst-Chr2 3040556 3043396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00387 8 526 Miscellaneous Gene Families AT4G22730 56.226 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Spst2g00387 PK_Tyr_Ser-Thr 2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00387 - - gmx:100777169 1195.26