Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00366 ATGAGAAGACATTGTGATATTCATCTCTCTCATGCTCTACTGTGCACCGTTTTTTGTTGTCTTGTGACAGCTTCTGCAATGACTGAGAAGGAAATTTTGCTTGAATTCAAGGGAAACATCACGGACGATCCATGGGCCAGCTTGAGTTCGTGGGTTTCAAGTGGGAACCCGTGCCATGATTACAAAGGTGTTTCGTGTAACTCTGAAGGGTTTGTGGAGAGAATCGTACTATGGAACACTAGTTTGGGAGGGGTGTTATCCTCGTCACTTTCGGGGTTGAAGAGGTTGAGGATATTGACGTTGTTCGGGAACCGTTTCTCGGGTCGTATTCCTGAAGGGTATGGTGATCTTCACTCACTGTGGAAGATCAATTTGAGTTCCAATGCTTTATCTGGTTCGATCCCTGAGTTCATTGGTGATTTGCCTAGCATTCGGTTTCTAGATTTATCCAAAAATGGCTTCACTGGGGAGATACCTTCGGCTTTGTTTAGGTACTGCTACAAAACCAAGTTCGTTTCTCTTTCGCATAACAACCTAGCTAGTTCAATTCCTGCCTCCTTGGTGAACTGCTATAACCTTGAAGGTTTTGATTTTTCCTTCAACAACCTCAGTGGGGTCGTCCCTTCACGGCTTTGTGGCATTCCAAGGTTGTCATATGTGTCGCTGAGAAGCAATGCCTTGTCAGGGAGCGTGCAGGAGCTCATTTCCTCATGCCAAAGTCTGGAACATTTGGATTTTGGAAGTAATAGGTTCACTGATTTGGCTCCATTTAGTGTCCTTGGAACACAAAATCTTACCTATCTCAATTTATCTTATAACGGATTTGGAGGACATATTCCTGAGATCAGTGCCTGTAGTGGGAGATTGGAAATCTTTGATGTTTCAGGGAATTCTTTGGATGGGGAGATTCCCTCCAGCATAACAAAATGCAAGAGCCTAAAACTCTTGGCGTTGGAGTTGAATAGGCTGGAGGGGAATATCCCAGTGGATATCCAGGAATTGCGGGGACTAATAGTTATCAAATTGGGTAATAATTCCATTGGTGGAATGATCCCCAAGGGTTTTGGCAACGTTGAGCTTCTTGAGTTGCTGGATTTGCACAATCTAAACCTCATTGGCCAAATTCCTGATGATATAAGCAATTGCAAGTTTCTCCTGGGGCTGGACGTTTCTGGTAATAAATTAGAAGGTGAGATTCCTCAGACTCTTTACAACTTGACAAACCTTGAATCTCTTAATCTACATCATAACCAGCTTAATGGAAGCATACCCCCAAACCTTGGAAACCTATCAAGGATCCAGTACCTAGATCTGTCCCATAATTCACTTTCTGGCCCAATCCCTGCTTCCCTTGGAAATTTAAATAAATTGACACATTTTGATCTCTCATTCAATAACCTCTCTGGTTTCATTCCTGAGCTTGTAAACATACAGCGTTTTGGTGAGACAGCATTTTCCAATAATCCTTTTCTCTGTGGTCGTCCTTTGGACACCCCTTGCTTGCTAAACAGAACTACATCACCTTCATCTCCTGGGAAGGCTAAAGTTCTAAGCACCTCAGCAATTGTTGCAATCGTTGCTGCAGCTGTAATTCTCACTGGGGTTTGTTTGGTGACCATCATGAATATGACGGCCCGAAGTAGAAAAAAAGAAGATGATCAGATCATGATTGTTGAGAGCACACCACTTGGATCAACAGAATCAAATCTTATAATTGGAAAGCTGGTTCTCTTCAGCAAAAGTTTACCATCGAAATATGAAGATTGGGAGGCAGGAACCAAAGCACTGCTCGACAAAGAGTCTTTGATAGGTGGTGGATCAATTGGTACAGTCTACCGAACTGATTTTGAAGGCGGGATCTCAATCGCAGTGAAAAAGCTAGAGACTTTGGGAAGGATCAGAAACCAGGAGGAATTTGAGCATGAAATTGGGCGACTAGGCAACCTTCAACACCCTAATTTAGTTGCTTTTCAAGGTTATTATTGGTCTTCTTCTATGCAGTTGATTTTATCGGAGTTTGTCCCAAATGGGAATCTCTATGATAATCTACACGGGTTGGGCTATGCTGGAACCAGCACTAGTAGAGGAAATAGGGAGTTGTATTGGTCTAGAAGGTTTCAAATTGCAGTGGGAACCGCAAGAGCCCTTGCTTATCTCCACCATGACTGTAGACCTCCAATTCTTCATCTCAACATTAAATCCTCTAACATCCTCCTAGATGACAAGTATGAAGCTAAGTTGTCTGATTATGGCTTAGGAAAGTTACTTCCCATTTTGGATAATTATGGTCTGACCAAATTCCACAATGCTGTGGGATATGTTGCACCAGAGTTGGCTCAAGGCCTGAGGCAGAGTGAGAAATGTGATGTTTATAGTTTTGGAGTCATTCTTTTGGAGCTGGTTACAGGGAGGAAGCCTGTGGAAAGTCCAACCACGAATGAAGTGGTGGTCTTGTGTGAATATGTAAGAGGTTTGTTAGAGACTAGCTCAGCTTCAGATTGCTTTGACAGAAATTTACTGGGCTTTACTGAGATCGAATTAATTCAAGTTATGAGATTGGGACTAATTTGTACTTCGGAGGATCCATTAAGGAGACCAAGCATGGCTGAGGTTGTCCAGGTCCTTGAGTCCATTAGAAATGGATTTGATTCCCATTAA 2658 0.427 MRRHCDIHLSHALLCTVFCCLVTASAMTEKEILLEFKGNITDDPWASLSSWVSSGNPCHDYKGVSCNSEGFVERIVLWNTSLGGVLSSSLSGLKRLRILTLFGNRFSGRIPEGYGDLHSLWKINLSSNALSGSIPEFIGDLPSIRFLDLSKNGFTGEIPSALFRYCYKTKFVSLSHNNLASSIPASLVNCYNLEGFDFSFNNLSGVVPSRLCGIPRLSYVSLRSNALSGSVQELISSCQSLEHLDFGSNRFTDLAPFSVLGTQNLTYLNLSYNGFGGHIPEISACSGRLEIFDVSGNSLDGEIPSSITKCKSLKLLALELNRLEGNIPVDIQELRGLIVIKLGNNSIGGMIPKGFGNVELLELLDLHNLNLIGQIPDDISNCKFLLGLDVSGNKLEGEIPQTLYNLTNLESLNLHHNQLNGSIPPNLGNLSRIQYLDLSHNSLSGPIPASLGNLNKLTHFDLSFNNLSGFIPELVNIQRFGETAFSNNPFLCGRPLDTPCLLNRTTSPSSPGKAKVLSTSAIVAIVAAAVILTGVCLVTIMNMTARSRKKEDDQIMIVESTPLGSTESNLIIGKLVLFSKSLPSKYEDWEAGTKALLDKESLIGGGSIGTVYRTDFEGGISIAVKKLETLGRIRNQEEFEHEIGRLGNLQHPNLVAFQGYYWSSSMQLILSEFVPNGNLYDNLHGLGYAGTSTSRGNRELYWSRRFQIAVGTARALAYLHHDCRPPILHLNIKSSNILLDDKYEAKLSDYGLGKLLPILDNYGLTKFHNAVGYVAPELAQGLRQSEKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRGLLETSSASDCFDRNLLGFTEIELIQVMRLGLICTSEDPLRRPSMAEVVQVLESIRNGFDSH 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00366 885 Pfam Leucine Rich Repeat 433 454 IPR001611 GO:0005515
Spst2g00366 885 SUPERFAMILY L domain-like 163 492 - -
Spst2g00366 885 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 165 504 - -
Spst2g00366 885 Pfam Protein kinase domain 599 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00366 885 ProSiteProfiles Protein kinase domain profile. 597 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00366 885 SMART LRR_typ_2 358 382 IPR003591 -
Spst2g00366 885 SMART LRR_typ_2 406 430 IPR003591 -
Spst2g00366 885 SMART LRR_typ_2 141 165 IPR003591 -
Spst2g00366 885 SMART LRR_typ_2 238 261 IPR003591 -
Spst2g00366 885 SMART LRR_typ_2 454 477 IPR003591 -
Spst2g00366 885 PANTHER LEUCINE RICH REPEAT KINASE 2 138 880 - -
Spst2g00366 885 CDD STKc_IRAK 603 878 - -
Spst2g00366 885 FunFam Putative LRR receptor-like serine/threonine-protein kinase 574 673 - -
Spst2g00366 885 Gene3D Phosphorylase Kinase; domain 1 568 673 - -
Spst2g00366 885 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 26 164 - -
Spst2g00366 885 Gene3D Ribonuclease Inhibitor 173 507 IPR032675 -
Spst2g00366 885 ProSiteProfiles Leucine-rich repeat profile. 240 261 IPR001611 GO:0005515
Spst2g00366 885 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 674 884 - -
Spst2g00366 885 ProSiteProfiles Leucine-rich repeat profile. 408 431 IPR001611 GO:0005515
Spst2g00366 885 Gene3D Transferase(Phosphotransferase) domain 1 674 884 - -
Spst2g00366 885 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Spst2g00366 885 Gene3D Ribonuclease Inhibitor 26 172 IPR032675 -
Spst2g00366 885 SUPERFAMILY Protein kinase-like (PK-like) 598 876 IPR011009 -
Spst2g00366 885 SUPERFAMILY L domain-like 72 161 - -
Spst2g00366 885 Pfam Leucine rich repeat 215 274 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00366 Spst-Chr2 2863012 2865755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00366 25 884 Receptor kinase-like Gene Family AT1G62950 66.053 0.0 1110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Spst2g00366 Pkinase 2.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00366 - - gmx:100805681 1566.98