Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00352 ATGGCTCATTTGGTTTATGGTGAAACTCCATCCTTTGGAGCTTCACACCATGGACAGGCTCAGCAAATTATTCCGTTTGCAACCAATGGAACTTCCTTAAGGATCCTACTTTTACATGGCAACTTGGAAATATGGGTCAACGAGGCCAGAAACCTTCCTAACATGGACATGTTTCACAAGAAAACGGGAGAAATGATTTCCATGTTGTCCCGGAGACTTGGCGGCAAAATCGAAAGCCACATTTCCAAAGCTGGAACCAGTGATCCCTATGTTACGGTGTCTGTGGCGGGTGCGGTGGTGGCCAGAACTTTTGTCATTAGAAACAGCGAGAACCCCATTTGGACGCAGCATTTCAATGTCCCCGTTGCGCACCTTGCTTCTGAAGTCCACTTCGTTGTCAAGGACAGTGATATTGTGGGTTCTCAGATTATAGGAGCAGTGGGAATTCCAGTGGAGCAGTTATATAGTGGCACAAGAGTTGAGGGCCTTTTCCCCATCCTTGGTGCTAATGGAAAACCATGTAAGGGTGGAGCAGTGCTGAGTTTATCCATTCAATACACCCCTGTTGAAAAGGTGGCTCTGTATAGCCACGGAGTAGGTGCTGGTCCTGATTATCAAGGGGTCCCTGGCACCTACTTTCCCCTTAGAAAAGGTGGAAAAGTTACACTTTATCAAGATGCTCATGTTCATGGAGGTTGCCTTCCCAGTTTGAAGGTGGATGGGGATGTGGATTATAAGCATGGAAGTTGTTGGCACCACATCTTTGATGCAATAAGTCAGGCTCGTCGATTGGTTTATATTATGGGGTGGTCTGTGTACTACAATGTTAGTCTCATTCGGGATAAGCATGATGGAAAGGCTTACACTTTAGGTGACCTTCTCAAAGATAAATCACAAGAAGGTGTGAGAGTGCTGCTCCTTGTGTGGGATGATCCCACTTCTGGAAGCGTGCTTGGATATAAAACGGTTGGACTTATGAACACTCATGATGAGGATACTCGCGAGTTTTTCAAGCACTCTTCAGTACGGGTGCTTCTTTGTCCACGAGCCGGTGGAAAAGGACATAGCTTTCTCAAAACGCAGGAAGCTGGAACAATCTATACCCATCATCAGAAGACAGTCATTGTAGATGCTGATGCTGGCCACAGTAAAAGAAAGATAAAAGCTTTTATCGGAGGTCTTGATTTATGTTTGGGTCGATATGATACCCCAAACCATTCCCTCTTCAGGACTTTGCAGACAACACACAAAGATGACTATCATAATCCTAACTTTGAGGGGCCTGTCACTGGTTGTCCAAGACAACCATGGCATGATTTGCATTCCCAAGTTGATGGTCCAGCAGCATATGACATCCTCACCAATTTTGAGGAACGTTGGTTGAGGGCTTTAAAAATGAATAGGTTTCAAAAGATGAAAAGTTCACATGATGATTCGTTACTTAAGATTGACAGAATCACTGACATTGTTGGCATTGATGACGTTCCTTCCCAAAACGAAGATAACCGGGAGACTTGGCATGTCCAGGTCTTCAGATCAATTGATTCCAATTCTGTGAAAGGATTTCCAAAGGAACCACAGGATGCAATAAGAAGGAACTTGGTTTGTGGAAAGAATGTACTGATAGACATGAGCATACATTCTGCTTATGTCAAGGCAATTCGAGCAGCTCAAAAGTTCATCTATATTGAGAACCAATACTTTCTTGGCTCATCATATAATTGGGATTCTTACAAAGACCTTGGTGCTAACAACTTAATTCCAATGGAAATTGCATTAAAAATAGCCAGCAAAATCAAACAGCATGAACGATTCTCTGTGTATATTCTCATTCCTATGTGGCCTGAAGGAGTACCTAAAGGTACACCTACTCAGCGGATTCTCTTTTGGCAGTTTAAAACAATGCAAATGATGTATGAAACGATTTACAAGGCCTTACAGGAGGCTGGGCTCGACAATCAGTATGAACCACAAGACTACTTGAACTTCTTTTGCCTTGGTAATCGGGAAATCCTTGACGACGGAAATGTTTCAAATGTTACAAAAACTACAAGAGAAAACACACCTCAGGCACTCACTAAAAAGAACAGAAGATTCATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGATGAATATGTGTTACTGGGGTCTGCTAACATTAACCAGCGATCCATGGAAGGCACCAGAGATACAGAGATAGCAATGGGAGCATATCAGCCTAATCATACTCGAGCAAAGAAGCAATCTAAACCTCGTGGACAGGTGCATGGTTATAGAATGTCACTGTGGAGCGAACATATAGGAAGTGTGGAAGAATGTTTTGAAGAACCAGAGAGCCTTGAGTGTGTAAGACGGATAAGGTCACTGAGTGAGTCTAACTGGAGACAGTATGCAGCTGATGAGGTAACTGAAATGAAAAGCCATTTGTTAAAATATCCCCTTGAAGTTGATTCAAAGGGCAAGGTGAAGCCTCTTCCTGGCTCTGAGACATTCCCAGACGTTGGGGGGAACATAAGTGGCACTTTCACAGTACTCAAAGAAAATCTCACCATCTGA 2562 0.4317 MAHLVYGETPSFGASHHGQAQQIIPFATNGTSLRILLLHGNLEIWVNEARNLPNMDMFHKKTGEMISMLSRRLGGKIESHISKAGTSDPYVTVSVAGAVVARTFVIRNSENPIWTQHFNVPVAHLASEVHFVVKDSDIVGSQIIGAVGIPVEQLYSGTRVEGLFPILGANGKPCKGGAVLSLSIQYTPVEKVALYSHGVGAGPDYQGVPGTYFPLRKGGKVTLYQDAHVHGGCLPSLKVDGDVDYKHGSCWHHIFDAISQARRLVYIMGWSVYYNVSLIRDKHDGKAYTLGDLLKDKSQEGVRVLLLVWDDPTSGSVLGYKTVGLMNTHDEDTREFFKHSSVRVLLCPRAGGKGHSFLKTQEAGTIYTHHQKTVIVDADAGHSKRKIKAFIGGLDLCLGRYDTPNHSLFRTLQTTHKDDYHNPNFEGPVTGCPRQPWHDLHSQVDGPAAYDILTNFEERWLRALKMNRFQKMKSSHDDSLLKIDRITDIVGIDDVPSQNEDNRETWHVQVFRSIDSNSVKGFPKEPQDAIRRNLVCGKNVLIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSYNWDSYKDLGANNLIPMEIALKIASKIKQHERFSVYILIPMWPEGVPKGTPTQRILFWQFKTMQMMYETIYKALQEAGLDNQYEPQDYLNFFCLGNREILDDGNVSNVTKTTRENTPQALTKKNRRFMIYVHSKGMIVDDEYVLLGSANINQRSMEGTRDTEIAMGAYQPNHTRAKKQSKPRGQVHGYRMSLWSEHIGSVEECFEEPESLECVRRIRSLSESNWRQYAADEVTEMKSHLLKYPLEVDSKGKVKPLPGSETFPDVGGNISGTFTVLKENLTI 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00352 853 Pfam Phospholipase D Active site motif 366 400 IPR001736 GO:0003824
Spst2g00352 853 Pfam Phospholipase D Active site motif 700 726 IPR001736 GO:0003824
Spst2g00352 853 SMART C2_3c 41 163 IPR000008 -
Spst2g00352 853 PIRSF PLD_plant 27 853 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Spst2g00352 853 Gene3D Endonuclease Chain A 238 485 - -
Spst2g00352 853 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 400 IPR001736 GO:0003824
Spst2g00352 853 CDD C2_plant_PLD 36 187 - -
Spst2g00352 853 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 699 726 IPR001736 GO:0003824
Spst2g00352 853 FunFam Phospholipase D 513 745 - -
Spst2g00352 853 Gene3D C2 domain 27 187 IPR035892 -
Spst2g00352 853 ProSiteProfiles C2 domain profile. 20 164 IPR000008 -
Spst2g00352 853 FunFam Phospholipase D delta 241 479 - -
Spst2g00352 853 Pfam C2 domain 40 166 IPR000008 -
Spst2g00352 853 Gene3D Endonuclease Chain A 498 754 - -
Spst2g00352 853 SMART pld_4 365 400 IPR001736 GO:0003824
Spst2g00352 853 SMART pld_4 699 726 IPR001736 GO:0003824
Spst2g00352 853 Pfam Phospholipase D C terminal 773 843 IPR024632 -
Spst2g00352 853 SUPERFAMILY Phospholipase D/nuclease 208 465 - -
Spst2g00352 853 SUPERFAMILY Phospholipase D/nuclease 525 784 - -
Spst2g00352 853 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
Spst2g00352 853 PANTHER PHOSPHOLIPASE D 32 842 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00352 Spst-Chr2 2752682 2757464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00352 15 853 Phospholipase D Gene Family (Wang group) AT2G42010 67.514 0.0 1256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00352 K01115 - gmx:100786241 1611.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00352 2 2752682 2757464 Spst2g00352 2 2752682 2757464 ECH