LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst2g00337	ATGTTGGCTGGGTGTTCTAGCGCTACATTGTTGTCACCAACGCATAGATCTGCACAGTTTCAAGCTTTCCATTTCCGATTACCTTCCATGAGCACCCACAGATTGGACCTGCCTTGTACCTTCCCAACGAACAGAGACACCTCGCGTTCCCAGCCCATAAGGCCCGTGGGCCTTTCATTCGACAACAAGCCCATCGAATCCTACTCTCTCAAGCACAACATTCGACTCCCACCTTTGGCGACTACCACAAGCAGCAGCGCGCACCAGACGACACCGTTCGTTGAAAGCAGAAGGGAAAGAGAGGCCAAGAACCATCATGAGCTCTGGGGCAAGAGTCTGAAGAAACGACTTGCGGAGCAAGCAAACGTGGACGTGGACCTGGAAGAGTGTTCGGCCAAGAGAAAAAAGTGTAGCAGCGATGACGTTAACTTTGTTGAAGGTTTGAGCCTAGCCCAAATGGGTGCTGCCAACTTTTGGTTACAACCTGGTGAAGAAGAGGAAAGAATTTGTTTTGTTCCTGGTGAAGTGGTTTCTGCTGTAACCAAGATCACAGACCCTGGTGAAAAGAATGAAGCTGAGGGTACTAGTCACAAAGCAGTCTCAGCCACAGCCTCAGTATCAGCTTCAGCTTCAAATTCTTCATCAGAAAGTCGAAGCTCGAGCCTGAGGTTTAACGATAATGTTTCGGAGCATGAAGTGGGAAACGGAAATGGGTCAAGGAATCCTCATCGATACCAAGAAACTGCAGTGGAGGAGGATACTGAAGAGGAGCATCGAGGATTTGAACTCGTAAGCTTAATCACCGCTTGTGTTGATGCTGTTGGATCGAAGAACGTGGGTGCGATTAATCATTTGGTAGCGAAATTGGGTGAGCTTGCGTGTCCCAGAGGAACCCCCATAAGACGCGTTTGCGCGTATTTCACGGAAGCCTTAGCGATGAGGGTGACGAGGGTTTGGCCTCAGGTGTTTCACATCAACATTCCTCGCGAAACGGAGGACGAAAGCGGCACTGCGCTGAGGCTTCTGAACGAGGTGAGCCCAATCCCCAAGTTCCTTCACTTCACATCAAACGAAATGCTGTTGCGGGCCTTCGAAGGGAAAGACAAGGTCCATATCATAGACTTCGACATAAAGCAGGGCCTTCAGTGGCCCAGTTTGTTCCAGAGTCTCGCGTCGAGGCCCAATCCCCCGAGGCACGTGAGAATCACGGGGATAGGGGAGTCGAAGCAGGAGCTGAACGAAACCGGCGAGCGCCTGGCTGGGTTCGCGGCGGCACTGAAGCTTCCCTTCGAGTTTCATCCTGTGGTGGACAGACTAGAGGACGTGCGACTCTGGATGCTCCACGTGAAAGAACACGAGAGCGTTGCTGTGAACTGCATTCTGCAGTTGCACAGGACGCTTCACGACGGAAGCGGAGGAGCGCTGAGGGATTTCCTGGGACTCGTCCGCAGCACCAATCCTACGGTAATGGTGATGGCGGAGCAAGAGGCGGAGCACGACGAGATAAGGTTGGAAGCAAGAGTGTGCAATTCGCTGAAATATTACTCGGCTCTGTTTGACTCCATTGAGCAGTGCGTTCCAGCGGAGAGTTCGGTGAGGTCGAAGATAGAGGAGATGTACGGTGGCGAGATAAGGAACATGGTTGGTTGCGAGGGAAGGGAGAGGGTGGAGAGGCATCGGAGTTTGGGGAACTGGAGGCAGATGATGGAGGAAGGAGGGTGGATGTGCGTTGGGGTTAGTGAGAGGGAAAGGGTTCAGAGCGAGTTGTTGTTGAAGATGTACTCTTCTTGCAACGGATTCAACGTGAAGAAGCAGGATGAATCAGCTCTCACTCTTGCTTGGGGGGACCACCCTCTCTACACGGTGTCCGCGTGGGCCCCGCTTCCTGCTGCAGTTTCTCACCCATGA	1908	0.5257	MLAGCSSATLLSPTHRSAQFQAFHFRLPSMSTHRLDLPCTFPTNRDTSRSQPIRPVGLSFDNKPIESYSLKHNIRLPPLATTTSSSAHQTTPFVESRREREAKNHHELWGKSLKKRLAEQANVDVDLEECSAKRKKCSSDDVNFVEGLSLAQMGAANFWLQPGEEEERICFVPGEVVSAVTKITDPGEKNEAEGTSHKAVSATASVSASASNSSSESRSSSLRFNDNVSEHEVGNGNGSRNPHRYQETAVEEDTEEEHRGFELVSLITACVDAVGSKNVGAINHLVAKLGELACPRGTPIRRVCAYFTEALAMRVTRVWPQVFHINIPRETEDESGTALRLLNEVSPIPKFLHFTSNEMLLRAFEGKDKVHIIDFDIKQGLQWPSLFQSLASRPNPPRHVRITGIGESKQELNETGERLAGFAAALKLPFEFHPVVDRLEDVRLWMLHVKEHESVAVNCILQLHRTLHDGSGGALRDFLGLVRSTNPTVMVMAEQEAEHDEIRLEARVCNSLKYYSALFDSIEQCVPAESSVRSKIEEMYGGEIRNMVGCEGRERVERHRSLGNWRQMMEEGGWMCVGVSERERVQSELLLKMYSSCNGFNVKKQDESALTLAWGDHPLYTVSAWAPLPAAVSHP	635

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst2g00337	635	MobiDBLite	consensus disorder prediction	196	244	-	-
	Spst2g00337	635	MobiDBLite	consensus disorder prediction	81	101	-	-
	Spst2g00337	635	ProSiteProfiles	GRAS family profile.	254	626	IPR005202	-
	Spst2g00337	635	PANTHER	OSJNBA0084A10.13 PROTEIN-RELATED	215	622	IPR005202	-
	Spst2g00337	635	Pfam	GRAS domain family	263	625	IPR005202	-
	Spst2g00337	635	MobiDBLite	consensus disorder prediction	185	256	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst2g00337	Spst-Chr2	2631523	2633430	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst2g00337	1	625	GRAS Transcription Factor Family	AT1G63100	51.248	0.0	590

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRAS	Spst2g00337		GRAS	5.9e-126	CL0063

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst2g00337	-		-	qsu:111999471	764.992

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