Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00333 ATGCGCATTGCGCACCTAACAACCGGAGCTCCGGCGATTTCAATGAACGGCGGCGAGGACAGAGAAAACGCAGCTTTTCGAGCTCTGGTGGATCGGTGCCGGAGCCTCGAGGAGAGCCAGGCCAAGCTAAGGGAGCAGTTCGATGAGCTACTGCAGAAGAAGCTCACAGTCAGGGACGATAACCATGACAATAACGAGGTCGTTGCTGATTCAACAACCCTCGATTTTCTTTCCGGTTACTTCTTATCTGGAAGTCCTTACGCAACCGTGTTGAAATGCATGGGCCACGCCGTTCACGTCCTCAGAGTTCCCTCCGCCGTGATCGTATACTGGAATCACTCGGCTGAAACTCTATATGGATGGAAGGACTACGAAATCATTGGCCAAAAAGTAACTAAATTCCTAATTGCCGAAGAAAATTATGCATCTATGCGAAAAATTCTGGAAAGGGTAGTTTCAGGAGTACCATGGTCTGGGCAGTTTCCTTTCAAGAAAAGATCTGGTGAAGTATTTATGGCATTGGTAACAAAAACTCCTCTTTATGAGGATGGTAAGCTTGTTGCTGTTATAACTGTTTCGAGTGACGCCACTATATTAAAATCTACGAATTCAGAAAATCAAAGAACATACGAATCTGGTAACAATGGCCAACCTGGAGTACAGAGGTTAAACTTCAAAAAAATTCAGTGGCCTCCGCGACCAATGATTGCACCAATGCCACAGATTGCTTCATGTGTTTCCAATCTGGTTCTCATTAGTGCATCAAAACTTCTCCCAGTGCTGCATAGTACTGATAACACAGTTTCCGTGAACACTTCAACAGATGCTGTTGCAGATGATGAAAAACCAGAGAAACGTGGCATATATGAAACAAAACCTCATTCCAGACATCTCCCTAAAGAAAACACAACTGCCACAGAGGCCTCTGAGAAGAATGAGTCTACTGCAGAATTTGGTCAAGCTTCTAAAATTTTAAGATATGTGATCTTCTCTATGATTAAATCACTTCAGGCAGCCAAGCTTCAAACTGGGGCACGTGCAAAATATGGGAAGGGTAATGGAAATATTAAAAATAATTGTACTGCTGATAATTCAAGAAGCAGTAGAGTGAGTAATGAAAATGATTCATCTGGGGGTTTAGTGCCATTAAATCGATATCAGGATGTTGTTAATGGAGCAGATAAAAAAGAAAGTCTTCAAAAATGTAAGTCTTCACTTGCAATGAAGAGAGCAGATACAACAGCGTCTGCATGTAGAGCTTCCACTGTTTCCAAAGATAGTTCTGATGCTACACATATGATGACACGAGATGAAGTGAAAAAGCAGCAAGAAGGCTCGCAATTGCCAAGTTCGAGGGAGAGTATAGGCAGCCATGAAAGCTCATCTAGCAAAGGGGATAATGAGTCAACCTCTGTTTCAGACTGTGAAATCCATTGGGAAGACCTTCAATTAAGAGAGGAGATTGGACAAGGTTCTTATGCAGTTGTTTATCATGGAATTTGGAATGGATCGGATGTTGCTGTCAAGGTTTATTTTGGGAACGGATACACAGAGGAGACTTTACAAGGCTACAGAAAAGAGATTGATATAATGAAGAGATTGAGACACCCTAATGTATTACTTTTCATGGGAGCAGTATACTCACAGGAAAGGCTTGCCATTGTGACAGAGTTATTACCTAGGGGAAGCCTTTTCAAAAATCTACACAGGAACAATCAGACATTAGACATCAGAAGACGTCTAAGGATGGCTCTTGATGTAGCTAGAGGAATGAATTATCTTCATCACAGAAATCCACCAATTGTGCATAGGGACCTGAAGTCTTCCAACCTGCTTGTAGATAAAAACTGGACTGTAAAGGTTGGAGATTTTGGCCTGTCTAGGTTGAAGGATGCAACTTTATTAACTACGAAATCTGGGAGAGGCACCCCTCAATGGATGGCCCCTGAAGTCCTTAGAAATGAACCTTCAAATGAGAAGTCTGATGTTTTCAGTTTTGGTGTGATCCTCTGGGAACTAATGACTGAATCCATTCCGTGGAAAAATTTGAATTCCTTACAGGTTGTCGGAGTCGTAGGCTTTATGGACAGACGACTGGACCTACCAGAGGGGCTTGATCCCCATGTTGCGTCAATCATCGATGATTGCTGGCGAAGTGATCCAGAGCAACGCCCATCATTTGAAGAGCTGATCCAGAGAACGTTGTTCCTTGTCAACAGAGTAACAGCAGTGTCAATTAGGAGAATTTCAGAATCCTAA 2259 0.4272 MRIAHLTTGAPAISMNGGEDRENAAFRALVDRCRSLEESQAKLREQFDELLQKKLTVRDDNHDNNEVVADSTTLDFLSGYFLSGSPYATVLKCMGHAVHVLRVPSAVIVYWNHSAETLYGWKDYEIIGQKVTKFLIAEENYASMRKILERVVSGVPWSGQFPFKKRSGEVFMALVTKTPLYEDGKLVAVITVSSDATILKSTNSENQRTYESGNNGQPGVQRLNFKKIQWPPRPMIAPMPQIASCVSNLVLISASKLLPVLHSTDNTVSVNTSTDAVADDEKPEKRGIYETKPHSRHLPKENTTATEASEKNESTAEFGQASKILRYVIFSMIKSLQAAKLQTGARAKYGKGNGNIKNNCTADNSRSSRVSNENDSSGGLVPLNRYQDVVNGADKKESLQKCKSSLAMKRADTTASACRASTVSKDSSDATHMMTRDEVKKQQEGSQLPSSRESIGSHESSSSKGDNESTSVSDCEIHWEDLQLREEIGQGSYAVVYHGIWNGSDVAVKVYFGNGYTEETLQGYRKEIDIMKRLRHPNVLLFMGAVYSQERLAIVTELLPRGSLFKNLHRNNQTLDIRRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDATLLTTKSGRGTPQWMAPEVLRNEPSNEKSDVFSFGVILWELMTESIPWKNLNSLQVVGVVGFMDRRLDLPEGLDPHVASIIDDCWRSDPEQRPSFEELIQRTLFLVNRVTAVSIRRISES 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00333 752 SUPERFAMILY Protein kinase-like (PK-like) 470 741 IPR011009 -
Spst2g00333 752 MobiDBLite consensus disorder prediction 290 316 - -
Spst2g00333 752 MobiDBLite consensus disorder prediction 348 384 - -
Spst2g00333 752 MobiDBLite consensus disorder prediction 444 470 - -
Spst2g00333 752 SUPERFAMILY PYP-like sensor domain (PAS domain) 105 197 IPR035965 -
Spst2g00333 752 ProSitePatterns Protein kinases ATP-binding region signature. 488 509 IPR017441 GO:0005524
Spst2g00333 752 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 300 735 - -
Spst2g00333 752 FunFam Serine/threonine-protein kinase isoform 1 473 560 - -
Spst2g00333 752 CDD STKc_MAP3K-like 488 733 - -
Spst2g00333 752 Gene3D Phosphorylase Kinase; domain 1 469 559 - -
Spst2g00333 752 Pfam PAS domain 107 197 IPR000014 -
Spst2g00333 752 ProSiteProfiles Protein kinase domain profile. 482 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00333 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 601 613 IPR008271 GO:0004672|GO:0006468
Spst2g00333 752 Coils Coil 26 53 - -
Spst2g00333 752 NCBIfam PAS domain S-box protein 106 203 IPR000014 -
Spst2g00333 752 FunFam PAS domain-containing protein tyrosine kinase family protein 560 748 - -
Spst2g00333 752 MobiDBLite consensus disorder prediction 437 472 - -
Spst2g00333 752 MobiDBLite consensus disorder prediction 290 307 - -
Spst2g00333 752 MobiDBLite consensus disorder prediction 354 381 - -
Spst2g00333 752 Gene3D Transferase(Phosphotransferase) domain 1 561 742 - -
Spst2g00333 752 ProSiteProfiles PAS repeat profile. 108 155 IPR000014 -
Spst2g00333 752 Gene3D PAS domain 83 215 - -
Spst2g00333 752 CDD PAS 108 184 IPR000014 -
Spst2g00333 752 PRINTS Tyrosine kinase catalytic domain signature 661 683 IPR001245 GO:0004672|GO:0006468
Spst2g00333 752 PRINTS Tyrosine kinase catalytic domain signature 705 727 IPR001245 GO:0004672|GO:0006468
Spst2g00333 752 PRINTS Tyrosine kinase catalytic domain signature 556 569 IPR001245 GO:0004672|GO:0006468
Spst2g00333 752 PRINTS Tyrosine kinase catalytic domain signature 595 613 IPR001245 GO:0004672|GO:0006468
Spst2g00333 752 PRINTS Tyrosine kinase catalytic domain signature 642 652 IPR001245 GO:0004672|GO:0006468
Spst2g00333 752 Pfam Protein tyrosine and serine/threonine kinase 482 732 IPR001245 GO:0004672|GO:0006468
Spst2g00333 752 SMART serkin_6 482 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00333 Spst-Chr2 2582774 2590231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00333 18 740 MAP Kinase Kinase Kinase AT4G23050 45.384 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Spst2g00333 PK_Tyr_Ser-Thr 5.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00333 - - vra:106777922 1214.91