Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00332 ATGGGTAAGGCATCCAAATGGTTTCGCGGTCTTTTGGGCCTCAAGAGACCGGACTCGCCGTCCTCCGCCGCCGCTACCAAACCGCCCAAGGACAGACGACGGTGGAGCTTCGTCAAGTCCTACAGAGAAAAGGACCATTCCGCCACGGACCACCATGCACCACCCACCAACGGAGGCCACTCCTCGGGTCACGTGGAAAGCGCTGATCCCCACATCGCAGCAGTCACCGCTGCCATGGCCGAGGCTGCCTTCGCCGCCGTGGCTCGACTCACTAGCAGTGGTCGGTGCCCTGCCACCGTCGCCGGAGAAGTTACTCGAGAAAAATGGGCAGCGGTTAAGATTCAAGCCGCCTTTCGAGGGTCTTTGCTACTAACGCGTATCGAGGTGCGTCCAGCGTCACCATCTCTCTGTGTTTCTTTTCCCTCCGTGTTGCCCTTTTCACTATTAAATGCCATCTTGCTTTACACTCTTCACGCACACGCACTGCCCAGAGCGCGACATAAAGTGTAA 510 0.5784 MGKASKWFRGLLGLKRPDSPSSAAATKPPKDRRRWSFVKSYREKDHSATDHHAPPTNGGHSSGHVESADPHIAAVTAAMAEAAFAAVARLTSSGRCPATVAGEVTREKWAAVKIQAAFRGSLLLTRIEVRPASPSLCVSFPSVLPFSLLNAILLYTLHAHALPRARHKV 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00332 169 ProSiteProfiles IQ motif profile. 107 135 IPR000048 GO:0005515
Spst2g00332 169 PANTHER IQ-DOMAIN 5-RELATED 1 122 - -
Spst2g00332 169 MobiDBLite consensus disorder prediction 1 66 - -
Spst2g00332 169 MobiDBLite consensus disorder prediction 27 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00332 Spst-Chr2 2572839 2573885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00332 1 45 IQD Protein Family AT4G23060 48.148 3.40e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00332 - - pvu:PHAVU_002G154900g 158.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04417 3 95708614 95712036 Spst2g00332 2 2572839 2573885 PCT