Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00331 ATGATAGATTCGCATGTAGATTGTAGAAGGGTTAATCAGGTGTTGGAAACTGATTTGAAAACTCAAGTACTACTCTTTTTCTTTTCCTGGTATAAGAATGATCCTTGGCTTGCCCATTGGTTTTTTGGTGGGTTTGTGGGGACAGGTGCAAATCTAAAGAAGCACCGTCACCACCCACCCTGTAATGCAAGGAAAGCCCTTCGTGCGTTGAAAGGTTTGGTGAAGCTACAGGCAATAGTGAGAGGTCACATTGAGAGGAAGCGCACATCAGAATGGTTGCAAAGAGTTCAAGCCCTCTTACGTGTTCAGGCCCAATTCCGTGCTGCCCGGGCCCAAGTTTCTCACTCCCCTTATTCCAATGCAAAGCCATCCACTGTCTACCTCCATGGTCCAGCCACACCAGACAAATTTGATAACCCGTTCAGATCCGAGAGCATGAAATACGATCGCTCATCATCCTTAGTCAAGAGAAACAACTCCAGATCCCGCATGCATATCAATGCCACTCAAGAGAAACATGGGAATAGACCAGATGGTCGCATTGATGAACAATCATGGCATCAACCAAGATCATGGTCAAGAGCCTGTAGCATGGACGAAGAAAGATGTCTCAGGATTCTAGAAAATGATTCTGTAAAATCACACGTTACATCAAAGCGGAGAAACCTCTTTTACTCCCCTACCCACGCTTTGGTTTGTGAAGTTCAGTCGTACAGTCCTCTGAAAGCGAACGAGGTTGAGGAGAACTCGTTTTGTGGTGCTGACAGTAGTCCTCAAACTTTATCTGCCTCTTCTAAAAATGGTGGCTCCAAAAGAAGCCCTTTTACTCCTACCAAGAGTGATGGCTCAAAAAGCCATGCAAGTGGTTGTTCTGAACCTGACTATCCAAGTTACATGGCATACACTGAATCCTCAATGGCAAAGGTAAGATCTGTGAGTGCTCCAAAGCAGAGGCCTCGTTATGAGAGGTCTTGTTCTTCTTCCAACAGGTACTCACTTCATGATCAAGGATTTGGTGACTCAAAATTGGACATGCAAAGGTTAGCTGCTTTACATGCAAACTTCACTAACAAAGTTTACCCTGGTTCTGGTCGTTTGGACAAGCTTGGTCTACCTAAGTAA 1122 0.4492 MIDSHVDCRRVNQVLETDLKTQVLLFFFSWYKNDPWLAHWFFGGFVGTGANLKKHRHHPPCNARKALRALKGLVKLQAIVRGHIERKRTSEWLQRVQALLRVQAQFRAARAQVSHSPYSNAKPSTVYLHGPATPDKFDNPFRSESMKYDRSSSLVKRNNSRSRMHINATQEKHGNRPDGRIDEQSWHQPRSWSRACSMDEERCLRILENDSVKSHVTSKRRNLFYSPTHALVCEVQSYSPLKANEVEENSFCGADSSPQTLSASSKNGGSKRSPFTPTKSDGSKSHASGCSEPDYPSYMAYTESSMAKVRSVSAPKQRPRYERSCSSSNRYSLHDQGFGDSKLDMQRLAALHANFTNKVYPGSGRLDKLGLPK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00331 373 MobiDBLite consensus disorder prediction 166 186 - -
Spst2g00331 373 ProSiteProfiles IQ motif profile. 71 98 IPR000048 GO:0005515
Spst2g00331 373 MobiDBLite consensus disorder prediction 250 287 - -
Spst2g00331 373 MobiDBLite consensus disorder prediction 250 291 - -
Spst2g00331 373 MobiDBLite consensus disorder prediction 148 186 - -
Spst2g00331 373 PANTHER IQ-DOMAIN 5-RELATED 63 334 - -
Spst2g00331 373 MobiDBLite consensus disorder prediction 308 333 - -
Spst2g00331 373 Pfam Protein of unknown function (DUF4005) 257 334 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00331 Spst-Chr2 2568334 2572590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00331 63 372 IQD Protein Family AT4G23060 41.463 3.14e-53 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00331 - - pvu:PHAVU_002G154900g 434.491