Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00319 ATGCTTTCTAACGGCAACAAGAAGGAGAGAGACCTTGAATTCTTCTTTGAATATGATATGAACGAAGGTGAAGGACGTGATACTGAAACTGCCAAGTTGGAGAGTGATGACGAAGAAAACAATATAACAAGCCTTCAATCTTTCACTTCTCTCCAATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTACACACTTGCAGCAACACCAAACTTTGATTCAATTCTACGAGTACCAAGTATTATACTTTCCAGTTTTGAAAACCGTTCAAAGAATAACTTGCAAATAGATGGAAAGACTCCTTTCCTCTCTAGTCCTGAAGTCAGTCCCCAATCAACCTTGTTGAAGGAAGGTTCAGTGGAAGGTCATTTAGAAGGCGAATTGCCCATTGGTCATGGGTGCAGCTTAATGCAAACAATTTTCAATGCAACCAATGTGATGGCTGGAGTTGGCATTCTGTCAACACCTTACACATTGAAGGAAGCTGGCTGGATGAGCATGGTGTTGATGGTTCTTTTTGCTATCACTTGTTGCTGTACAGCCACCTTTATGAGATACTGTTTTGAAAGTAGAGAAGGAATCAATAGCTATCCTGATATAGGAGAAGCTGCATTTGGAAAATATGGTCGTATTATTGTATCAATCATCTTGTACACTGAATTATATTCATGCTGTGTAGAATTCATCACCTTGGAAGGAGATAACCTCACTAGACTATTTCCCGGAAAATCCTTAGATTTGGGTAGTTTCCACTTAGATTCTGTGCACTTGTTTGGAATTTTGGCTGCACTTATATTTATCCCAACTGTTTTGCTGAAGGATCTTCGTATAATCTCTGCACTGTCAGCTGGAGGGGTTTTTGCTACACCGTTGATTGTTGTCTGTGTGTCTTGTATTGGTATAATGGATGGTGCTGGATTCCATCACAGTACTAAATTGGTCAACTGGAGTGGCATTCCATTAGCTATTGGAATCCACGGGTTTTGCTTCGCAGGACATTCCGTTTTTCCAAATATTTACCAATCTATGGCTGATAAAACACAGTTTACTAAAGCAGTAATAGTATGTTTTGTATTGTCTGTTGCAATATATGGAGGTGTTGCCATCATGGGATTCCTTACTTTTGGTGACGACACTTTGTCTCAAATAACCTTAAATTTGCCACGAAATGCATTTGCTTCCAAGGTTGCAATATGGACAACAGTGACTAGAAGTCTCGAGGAGTTGCTACCAGATAGATTTTCAAATACTTATCCGTGTTTCGTTCTTATCAGAATTGCACTTGTTGTATCTACAGTTTGTGCTGCTTTTCTTATTCCTTTTTTTGGGTATGTGATGGCTTTAATTGGCTCTCTCTTCAGTATACTTGTGGTGGCATTGAGCGTTGCAATTGCTGCATTTGGAGTCATTTTTGGAATTTTAGGAACTTATTCATCTGTGCTCAATATTGTGAAGAGTTACTGA 1464 0.3914 MLSNGNKKERDLEFFFEYDMNEGEGRDTETAKLESDDEENNITSLQSFTSLQWPQSYKETTDSYTLAATPNFDSILRVPSIILSSFENRSKNNLQIDGKTPFLSSPEVSPQSTLLKEGSVEGHLEGELPIGHGCSLMQTIFNATNVMAGVGILSTPYTLKEAGWMSMVLMVLFAITCCCTATFMRYCFESREGINSYPDIGEAAFGKYGRIIVSIILYTELYSCCVEFITLEGDNLTRLFPGKSLDLGSFHLDSVHLFGILAALIFIPTVLLKDLRIISALSAGGVFATPLIVVCVSCIGIMDGAGFHHSTKLVNWSGIPLAIGIHGFCFAGHSVFPNIYQSMADKTQFTKAVIVCFVLSVAIYGGVAIMGFLTFGDDTLSQITLNLPRNAFASKVAIWTTVTRSLEELLPDRFSNTYPCFVLIRIALVVSTVCAAFLIPFFGYVMALIGSLFSILVVALSVAIAAFGVIFGILGTYSSVLNIVKSY 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00319 487 Pfam Transmembrane amino acid transporter protein 134 393 IPR013057 -
Spst2g00319 487 FunFam Amino acid transporter AVT1A 132 486 - -
Spst2g00319 487 PANTHER OS05G0424000 PROTEIN-RELATED 142 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00319 Spst-Chr2 2465889 2471398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00319 21 448 Amino Acid or Auxin Permease AAAP Family AT2G41190 58.520 7.87e-177 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00319 K15015 - gmx:100816368 760.755