Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00318 ATGAACCCATGTACTTCATTGTGGTATCTCTCTTTGATTTCCACGCTCGCTTTCGTGGCTTCTAACACTGTGCCCTCAAATGAAGTTTGGGCGCTTAGGTGCTTTAAAGAAGCTGTTTATGAAGATCCATTTCAAGTTTTGTCCAATTGGGATACGGTAGAATCAGATCCTTGTAACTGGTTTGGCGTCACCTGCACTATGGTTCGAGATCATGTCATCAATCTAAACATATCCGGATCATCACTAAAGGGGTTTCTTGCACCAGAGTTGGGGCAACTCACCTACTTGCAAGAACTAATTTTGCACGGGAACAATCTGATTGGAACAATACCTAGAGAGTTGGGCTTGTTGAAATATCTCAGGGTGTTTGATTTAGGAATGAATCAGCTAACAGGACCAATTCCTCCAGAGATTGGAAATCTAATTCAAGTTGTGAAAATAAACTTGCAGTCCAATGGCTTAACTGGTAGGCTACCTCCTGAGTTTGGAAACTTAAGATTCCTTCAAGAACTTCGGCTGGATAGGAATAGACTTCAAGGACCTATTCCTGCTGGCGGTAGCTCTCATTTTGATTCAAATATGCGTGGGATGTATGCATCAAAGGAGAATGTAACTGGACTCTGTCGTTCATCTCAGTTGCAAGTAGCGGACTTCTCATATAATTTTTTAGTGGGTAGCATACCCAAATGCTTGGAGCATCTTCCGAGGTTAAGCTTTCAAGGGAATTGCATCCAGAGCCAGGATTTAAAGCAGCGACCTTCTATACAGTGTGCGGGTGCTTCACCTGCCAGTGCCAAGAGCCAGCCAGTTGTGAATCCAGGCCACCAAACTGCTGAATATGTGTCCAATCATCACGGAGCATCAAAACCTGTTTGGCTTTTGGCTCTTGAAATAGTAACTGGAACTATGGGGGGCTCTCTCATTCTGGTTGCTATTCTTGCTGCTTTTCAGAGATGTAACAAAAAATCATCTATAATTATTCCTTGGAAAAAATCTGGAAGCCAGAAAGATCAAACAGCGGTATATATAGACCTCGAGATGTTGAAAGATGTGAGAAGGTATAGCAGACAAGAGCTTGAAGTGGCCTGTGAAGATTTCAGCAACATAATTGGGTCCTCACCAGACAGTGTGGTTTACAAGGGAACAATGAAAGGTGGGCCTGAGATTGCTGTGATTTCCCTCTGCATCAAGGAGGAGCAATGGACAGGATATCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCTAGGTTAAATCATGATAATATAGGAAAACTACTTGGCTATTGTAGAGAGGATACTCCATTTACAAGGATGTTGATTTTTGATTATGCTTCAAATGGGACACTTCATGATCACCTACATTGTTATGAAGAAGGATGTCAATTCTCTTGGACACGGCGTATGAAGATTGCCATAGGCATTGCACGTGGACTCAAGTATTTGCATACCGAAGTGGAGCCTCCATTTACTATCTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCTAAGTTGGTTGATTTCGAAAGTTGGAAGACAATTCTTGAAAGATCAGAGAAGAATTCTGGTTCCATTGGCAGCCAAGGTGCTATCTGTGTTCTTCCAAACTCCCTTGAAGCACGCCACCTTGATACCAAAGGAAATATATTTGCTTTTGGGGTACTTTTGTTGGAGTTAATCAGCGGGAGACCTCCATACTGCAAGGACAAAGGATACTTGGTTGACTGGGCCAAGGACTACCTTGAAAGGGGAGATGAAATGTCACGCGTGGTGGATCCTGAACTGAAACATTTTAGACATGAAGACCTCAAAGTGATATGCGAGGTAATAACTCTCTGTATGAACCCTGATAAATCTGCGCATCCATCTATGCGAGAAATATGTAGCATGCTGGAGAGCAGAATCGACACGTCAGTAAGCGTGGAGCTTAAGTCATCATCTTTGGCTTGGGCCGAACTTGCACTTTTATCTTGA 1992 0.4287 MNPCTSLWYLSLISTLAFVASNTVPSNEVWALRCFKEAVYEDPFQVLSNWDTVESDPCNWFGVTCTMVRDHVINLNISGSSLKGFLAPELGQLTYLQELILHGNNLIGTIPRELGLLKYLRVFDLGMNQLTGPIPPEIGNLIQVVKINLQSNGLTGRLPPEFGNLRFLQELRLDRNRLQGPIPAGGSSHFDSNMRGMYASKENVTGLCRSSQLQVADFSYNFLVGSIPKCLEHLPRLSFQGNCIQSQDLKQRPSIQCAGASPASAKSQPVVNPGHQTAEYVSNHHGASKPVWLLALEIVTGTMGGSLILVAILAAFQRCNKKSSIIIPWKKSGSQKDQTAVYIDLEMLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEQWTGYLELYFQREVADLARLNHDNIGKLLGYCREDTPFTRMLIFDYASNGTLHDHLHCYEEGCQFSWTRRMKIAIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSLEARHLDTKGNIFAFGVLLLELISGRPPYCKDKGYLVDWAKDYLERGDEMSRVVDPELKHFRHEDLKVICEVITLCMNPDKSAHPSMREICSMLESRIDTSVSVELKSSSLAWAELALLS 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00318 663 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Spst2g00318 663 Gene3D Transferase(Phosphotransferase) domain 1 446 653 - -
Spst2g00318 663 PANTHER PROTEIN MALE DISCOVERER 2 20 663 - -
Spst2g00318 663 Pfam Protein tyrosine and serine/threonine kinase 368 637 IPR001245 GO:0004672|GO:0006468
Spst2g00318 663 Gene3D Ribonuclease Inhibitor 141 262 IPR032675 -
Spst2g00318 663 ProSiteProfiles Protein kinase domain profile. 364 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00318 663 SUPERFAMILY L domain-like 26 238 - -
Spst2g00318 663 Gene3D Phosphorylase Kinase; domain 1 336 445 - -
Spst2g00318 663 Gene3D Ribonuclease Inhibitor 28 140 IPR032675 -
Spst2g00318 663 FunFam Inactive receptor-like serine/threonine-protein kinase 338 445 - -
Spst2g00318 663 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 25 184 - -
Spst2g00318 663 SUPERFAMILY Protein kinase-like (PK-like) 344 638 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00318 Spst-Chr2 2446453 2450769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00318 41 642 Receptor kinase-like Gene Family AT5G45780 28.896 2.11e-55 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Spst2g00318 PK_Tyr_Ser-Thr 8.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00318 - - gmx:100794714 1194.87