Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00315 ATGGCGAAGTTGTTAGCCTTAAGTTGCTGGCGAAACCTCTCGCCGCGACCTCACTACCCCTCCATGCCTAAATACCCCAAGGGACAGCCCGCCACCACCGTCGAGGAACTCTCAGACTCCACTGCTCTTTTCTCCGTCGTCGGAATGACTTGTGCCGCCTGCGCCGGTTCCGTCGAGAAGGCCGTCAAACGCCTCCCCGGGATCCGCGAAGCCATCGTCGACGTCCTCAACAACCGCGCCCACGTCATCTTCTACCCCTCCTTCGTTAACGAAGAGACAATTCGCGAGGCGATCGAAGATGCGGGTTTCGAAGCGCTATTACTCACGGACGCCACACACGAGAAATCCGTTCAAGTATGCCGCATCCAAATCAAAGGAATGACCTGCACCTCCTGTTCCTCCACGCTGGAATCCGCTTTACAAGCCCTTCACGGTGTCCTCGAAGCCCGCGTGGGCCTAGCCACTGAAGAGGCCCAAGTCCACTACAACCCAACTCTCCTCACTCCAAACCACATTCTGCAAGCCATAGAAGATTCCGGATTCGAAGCCGCGCTCATCAGTTTAAGCGAAGACTTAACCAAGATAGACCTCCACGTGGACGGCGCAGTAACAGATGACGCTGCCATGAAACTAATACAGGATTCTCTGCGGACACTCCCAGGAGTCCTTGCGGTAGACTTCACCGCGGAACTCAGCAAAATATCGGTTTCTTACAAACCGGACGTCACAGGACCCAGAAATCTCATCAGCGTGATTGAGCAACCAGGGAATGGGAACTTCAAGGCGAAGATATATCCCACAGAAGAAGGACAAAGAGACTCTCACAGACGCCAGGAAACAAGGCAGTATTATAAATCTTTCTTATGGAGCTTGGTGTTTACTATTCCTGTGTTTCTAACCTCCATGGTGTTTATGTATGTCCCTGGAATTAAGGAAGCACTTGATGCTAAAATCGTGAACATGCTTACCGTGGGGGAGGTTGCACGGTGGTTGCTGTCCACGCCGGTTCAGTTCGTACTCGGCTGGCGGTTTTACTCCGGTTCTTATAAATCGTTACGCCGTGGCTCTGCGAACATGGATGTTCTCATTGCGTTGGGAACAAACGCAGCGTATTTTTACTCTGTTTACTCTGTTTTGAGAGCTGCAACTTCGCCGCATTTCGAGGGGAATGATTTCTTCGAGACGAGTGCGATGCTTATCTCGTTCATTCTGCTTGGGAAGTATCTGGAGATTTTGGCGAAGGGTAAGACGTCTGATGCGATTGCCAAGCTCATGAACTTGACGCCGGACACGGCGGTTTTGCTGACTTTGGACGGCGATGGGAATGTTGCGGGAGAGGAGGAGATTGATAGCAGGTTGGTTCAGAAGAACGATGTGATTAAGGTTGCTCCTGGGGCGAAAGTGGCTTCGGATGGGTTTGTTGTGTGGGGGCAGAGTCACGTGAATGAGAGCATGATCACGGGGGAGTCGCGTCCCGTGGCGAAGAGGAAAGGGGACACTGTTATTGGAGGAACTGTGAATGAGAATGGAGTTTTGCATGTTAAGGCGACGAGGGTGGGATCTGAGAGTGCTCTTTCTCAGATTGTTCGCCTTGTGGAGTCAGCGCAGATGGCTAAAGCACCTGTGCAGAAGTTTGCTGATCGCATATCCAGATACTTTGTGCCTCTGGTGATTGTGATTTCGTTCTCGACTTGGCTTGCCTGGTTTTTGGCGGGAAGATATCATGCTTACCCAGAGTCTTGGATACCGTCATCAATGGACAGCTTCGAGCTTGCTTTGCAGTTTGGAATATCTGTTATGGTCATAGCCTGCCCTTGTGCTTTGGGTTTAGCGACGCCAACTGCGGTTATGGTTGGGACGGGAGTTGGTGCATCTCAGGGTGTGCTCATCAAAGGAGGGCAGGCTTTAGAGAGTGCACATAAGGTGAACTGCATTGTTTTCGATAAGACGGGTACTCTCACTGTGGGGAAACCTGTAATAGTGAGAACAGAACTATTGACAAAGATGGTACTCCGGGAATTCTATGAACTTGTGGCTGCAACTGAGGTGAATAGTGAACATCCACTGGCGAAGGCCGTTGTTGAGTATGCTAAAAAATTTAGAAATGAAGAGAACCCTTCTTGGGCAGAAGCACGAGATTTTGTTTCCATTACAGGACACGGAGTAAAGGCCACTGTTCATAACAAAGAAATAATGGTGGGTAATAAGAGCTTGTTGGCTGACCATAACATTCCAATTCCTGTTGCTGCTGAAGAAATGCTTGCTGAAGCAGAAAAGATGGCTCAAACAGGAATTTTGGTATCTGTAAATGGGAAAGTGGCTGGAGTTATAGCAGTATCCGATCCACTGAAACCAGGTGCCCAAGAAGTCATTTCCATTCTCAAGTCAATGAAAATCAAGAGCATCATGGTGACTGGGGACAACTTCGGAACGGCTAGTTCTATCGCGAGGGAAGTAGGAATTGAAAATGTTATTGCTGAGGCCAAACCGGATCAAAAAGCAGAGAAGGTGAAAGAATTGCAGGCTTCTGGTTACACTGTGGGTATGGTGGGGGATGGTATCAATGATTCGCCTGCGCTTGTGGCAGCGGATGTGGGAATGGCAATAGGTGCTGGTACAGACATTGCTATCGAGGCTGCTGATATTGTCCTCATGAAGAGCAACTTGGAGGATGTCATTACTGCTATTGACCTTTCCAGAAAAACATTTTCCCGTATACGCCTGAATTACGTTTGGGCTTTGGGTTATAACTTACTTGGAATCCCAATTGCTGCAGGAGCTCTTTTCCCTTCTACAAGATTCAGATTGCCACCCTGGATTGCTGGGGCTGCTATGGCCGCCTCCTCTGTCAGCGTTGTTTGCTGTTCTCTGTTGTTGAAATATTACAGGAGACCCAGGAAGCTCCACAACCTTGAGATACGAGGCATAACCGTCGAGTCCTCCTCCACTGGCATATGA 2958 0.4953 MAKLLALSCWRNLSPRPHYPSMPKYPKGQPATTVEELSDSTALFSVVGMTCAACAGSVEKAVKRLPGIREAIVDVLNNRAHVIFYPSFVNEETIREAIEDAGFEALLLTDATHEKSVQVCRIQIKGMTCTSCSSTLESALQALHGVLEARVGLATEEAQVHYNPTLLTPNHILQAIEDSGFEAALISLSEDLTKIDLHVDGAVTDDAAMKLIQDSLRTLPGVLAVDFTAELSKISVSYKPDVTGPRNLISVIEQPGNGNFKAKIYPTEEGQRDSHRRQETRQYYKSFLWSLVFTIPVFLTSMVFMYVPGIKEALDAKIVNMLTVGEVARWLLSTPVQFVLGWRFYSGSYKSLRRGSANMDVLIALGTNAAYFYSVYSVLRAATSPHFEGNDFFETSAMLISFILLGKYLEILAKGKTSDAIAKLMNLTPDTAVLLTLDGDGNVAGEEEIDSRLVQKNDVIKVAPGAKVASDGFVVWGQSHVNESMITGESRPVAKRKGDTVIGGTVNENGVLHVKATRVGSESALSQIVRLVESAQMAKAPVQKFADRISRYFVPLVIVISFSTWLAWFLAGRYHAYPESWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVIVRTELLTKMVLREFYELVAATEVNSEHPLAKAVVEYAKKFRNEENPSWAEARDFVSITGHGVKATVHNKEIMVGNKSLLADHNIPIPVAAEEMLAEAEKMAQTGILVSVNGKVAGVIAVSDPLKPGAQEVISILKSMKIKSIMVTGDNFGTASSIAREVGIENVIAEAKPDQKAEKVKELQASGYTVGMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYVWALGYNLLGIPIAAGALFPSTRFRLPPWIAGAAMAASSVSVVCCSLLLKYYRRPRKLHNLEIRGITVESSSTGI 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00315 985 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 11 974 - -
Spst2g00315 985 FunFam Copper-transporting ATPase HMA5 117 188 - -
Spst2g00315 985 SUPERFAMILY HMA, heavy metal-associated domain 41 109 IPR036163 GO:0046872
Spst2g00315 985 SUPERFAMILY Calcium ATPase, transmembrane domain M 392 927 IPR023298 -
Spst2g00315 985 ProSitePatterns E1-E2 ATPases phosphorylation site. 648 654 IPR018303 -
Spst2g00315 985 Gene3D - 653 730 IPR023299 GO:0000166
Spst2g00315 985 Gene3D - 731 781 IPR023299 GO:0000166
Spst2g00315 985 Gene3D - 414 536 - -
Spst2g00315 985 NCBIfam heavy metal translocating P-type ATPase 359 959 IPR027256 GO:0006812|GO:0016020|GO:0019829
Spst2g00315 985 NCBIfam copper ion binding protein 122 183 IPR006122 GO:0005507
Spst2g00315 985 NCBIfam copper ion binding protein 44 105 IPR006122 GO:0005507
Spst2g00315 985 PRINTS Copper-transporting ATPase 1 signature 41 66 - -
Spst2g00315 985 PRINTS Copper-transporting ATPase 1 signature 142 163 - -
Spst2g00315 985 PRINTS Copper-transporting ATPase 1 signature 67 90 - -
Spst2g00315 985 PRINTS Copper-transporting ATPase 1 signature 96 116 - -
Spst2g00315 985 ProSitePatterns Heavy-metal-associated domain. 124 153 IPR017969 GO:0046872
Spst2g00315 985 SUPERFAMILY HAD-like 645 956 IPR036412 -
Spst2g00315 985 CDD HMA 122 184 IPR006121 GO:0046872
Spst2g00315 985 PRINTS Copper-transporting ATPase signature 416 434 - -
Spst2g00315 985 PRINTS Copper-transporting ATPase signature 555 569 - -
Spst2g00315 985 PRINTS Copper-transporting ATPase signature 344 363 - -
Spst2g00315 985 PRINTS Copper-transporting ATPase signature 396 415 - -
Spst2g00315 985 PRINTS Copper-transporting ATPase signature 827 844 - -
Spst2g00315 985 Gene3D - 118 189 - -
Spst2g00315 985 Gene3D - 195 256 - -
Spst2g00315 985 FunFam Copper-transporting ATPase HMA5 39 110 - -
Spst2g00315 985 SUPERFAMILY HMA, heavy metal-associated domain 115 188 IPR036163 GO:0046872
Spst2g00315 985 Gene3D - 613 907 IPR023214 -
Spst2g00315 985 FunFam Copper-transporting ATPase 1, putative 414 536 - -
Spst2g00315 985 Pfam Heavy-metal-associated domain 44 104 IPR006121 GO:0046872
Spst2g00315 985 Pfam Heavy-metal-associated domain 122 182 IPR006121 GO:0046872
Spst2g00315 985 Pfam E1-E2 ATPase 428 624 - -
Spst2g00315 985 ProSiteProfiles Heavy-metal-associated domain profile. 193 260 IPR006121 GO:0046872
Spst2g00315 985 FunFam Probable copper-transporting ATPase HMA5 748 907 - -
Spst2g00315 985 CDD P-type_ATPase_Cu-like 285 960 - -
Spst2g00315 985 ProSiteProfiles Heavy-metal-associated domain profile. 40 106 IPR006121 GO:0046872
Spst2g00315 985 NCBIfam HAD-IC family P-type ATPase 399 932 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g00315 985 SFLD C1.7: P-type atpase like 628 902 - -
Spst2g00315 985 ProSitePatterns Heavy-metal-associated domain. 46 75 IPR017969 GO:0046872
Spst2g00315 985 Gene3D - 37 107 - -
Spst2g00315 985 SUPERFAMILY HMA, heavy metal-associated domain 189 257 IPR036163 GO:0046872
Spst2g00315 985 PRINTS P-type cation-transporting ATPase superfamily signature 646 660 - -
Spst2g00315 985 PRINTS P-type cation-transporting ATPase superfamily signature 850 869 - -
Spst2g00315 985 PRINTS P-type cation-transporting ATPase superfamily signature 797 807 - -
Spst2g00315 985 PRINTS P-type cation-transporting ATPase superfamily signature 775 786 - -
Spst2g00315 985 PRINTS P-type cation-transporting ATPase superfamily signature 482 496 - -
Spst2g00315 985 PRINTS P-type cation-transporting ATPase superfamily signature 873 885 - -
Spst2g00315 985 Pfam haloacid dehalogenase-like hydrolase 642 864 - -
Spst2g00315 985 SUPERFAMILY Calcium ATPase, transduction domain A 446 532 IPR008250 -
Spst2g00315 985 CDD HMA 44 105 IPR006121 GO:0046872
Spst2g00315 985 ProSiteProfiles Heavy-metal-associated domain profile. 118 184 IPR006121 GO:0046872
Spst2g00315 985 SFLD p-type atpase 628 902 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00315 Spst-Chr2 2418769 2422777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00315 3 979 Primary Pumps ATPases AT1G63440 74.470 0.0 1513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00315 K17686 - gmx:100816893 1717.98