Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00306 ATGGGCATATCACCTGAAGATCACTATCTGTTGAAAATTACAAATGTGAATAGCTTAGGTTCGCAGTGGGCAGAACTAGCCAAAAAGGTGGCATCAGATTCTGGGGCACTCAGCCTGGATAAAGTTTTTGAACTTGTAGCTGAAGGTGAAAAGTTGCCTGTTAATGCGAACGAGGAACTAAGGATGTTAAGAGCACGATGCATGCTTTATTGCATTTGTCGAAAGCCCTTTGATCCGGAAAGGATGATTGCATGTTGTCATTGTAATGAGTGGTATCACTTCGATTGCATGAAATTACCATGCACAAGAGAGGTCTACATTTGTCCCGCGTGTAACCCATGTACAGAAGGATTACCTTCAAACCATGACAGATTAGTTAGTGGCAAATTTGAGGAGCCTAAAACCCCGTCTCCCAGGCATTCAAACCCTAGAAAGAAACAGAAGAGAGACGTGCCCAGTGTCACTTGCAATATGTTCGCTACCAGGGATGTGGATAGTGAGTTTAGGTATTCGAGTGGGATAGAATGTCTAAAGTGGCAAAATCGAAAGCCTTTCAGAAGAGCAGCTAAGAAACGTGTTCAACTTCGAAGTCTTTCTCCATTTCTTTGCATACAACAATAG 621 0.4267 MGISPEDHYLLKITNVNSLGSQWAELAKKVASDSGALSLDKVFELVAEGEKLPVNANEELRMLRARCMLYCICRKPFDPERMIACCHCNEWYHFDCMKLPCTREVYICPACNPCTEGLPSNHDRLVSGKFEEPKTPSPRHSNPRKKQKRDVPSVTCNMFATRDVDSEFRYSSGIECLKWQNRKPFRRAAKKRVQLRSLSPFLCIQQ 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00306 206 PANTHER CXXC-TYPE ZINC FINGER PROTEIN 1 14 121 IPR037869 GO:0048188
Spst2g00306 206 MobiDBLite consensus disorder prediction 125 152 - -
Spst2g00306 206 SMART PHD_3 70 112 IPR001965 -
Spst2g00306 206 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 113 IPR013083 -
Spst2g00306 206 ProSitePatterns Zinc finger PHD-type signature. 71 111 IPR019786 -
Spst2g00306 206 MobiDBLite consensus disorder prediction 125 139 - -
Spst2g00306 206 SUPERFAMILY FYVE/PHD zinc finger 65 117 IPR011011 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00306 K11446 - gmx:100819576 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00306 2 2373292 2374384 Spst2g00306 2 2373292 2374384 ECH
Spst3g04477 3 96350139 96361859 Spst2g00306 2 2373292 2374384 PCT