Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00287 ATGATCATTCCTGAGAAGAACCGTCGTGAGATCTGCAAATACCTCTTCCAAGAGGGAGTTTGCTATGCGAAGAAGGACTTCAATCTGGCGAAGCACCCGGATATTGATGTTCCAAATCTTCAGGTCATAAAATTGATGCAGAGTTTCAAGTCTAGGGAGTATGTGCGCGAGACATTTGCATGGATGCATTATTACTGGTTCCTCACCAACGATGGAATTGAGTTCCTCAGGACATACCTCAACCTTCCCTCAGAAATTGTTCCTGCCACTCTCAAGAAGCAGGCCAAACCCGCCGGAAGACCATTCGGTGGCCCACCTGGTGATCGCCCCAGAGGTCCACCACGCTTTGATGGAGAAAGGAGATTCGGTGGCGATAGAGATGGATACCGTGGAGGTCCCCGGGGACCTGGTGGTGATTTTGGAGACAAGGGTGGAGCTCCTGCTGACTACAGACCTTCATTTGGGGGTCCTGGTGGAAGGCCTGGTTTCGGTCGTGGTGCTGGTGGTTTTGGAGCACCAACTAGTTCAAACATTCCTTAA 540 0.5074 MIIPEKNRREICKYLFQEGVCYAKKDFNLAKHPDIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFDGERRFGGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGFGAPTSSNIP 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00287 179 MobiDBLite consensus disorder prediction 91 179 - -
Spst2g00287 179 MobiDBLite consensus disorder prediction 112 128 - -
Spst2g00287 179 Gene3D - 1 104 IPR036388 -
Spst2g00287 179 PANTHER 40S RIBOSOMAL PROTEIN S10 1 173 IPR037447 -
Spst2g00287 179 FunFam 40S ribosomal protein S10 1 104 - -
Spst2g00287 179 Pfam Plectin/S10 domain 3 94 IPR005326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00287 Spst-Chr2 2194642 2196284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00287 1 179 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 74.860 7.25e-77 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00287 K02947 K09422 gmx:100803556 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00287 2 2194642 2196284 Spst2g00287 2 2194642 2196284 ECH
Spst2g00287 2 2194642 2196284 Spst3g01070 3 14069155 14071678 PCT