Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00272 ATGGAACAGAGAAACATTTTGTTATCGGCGCTGGGTGTTGGGGTGGGCGTAGGAGTGGGAATTGGATTGTCTGCTGGACAAGGCTTTACCAAATGGGGAGTTAATAATTCATCCTCAAACGGCGTTACTCCGGAGAACATCGAACGCGAAATGCTACGACTTGTCGTCGATGGCAGAGAAAGCAAGGTCACTTTTGATGAATTCCCTTTTTATCTCAGGGAGCAGACAAGGGCGATGCTTACTAGTGCTGCTTATGTCCATCTGAAGCATGCGGAGATTTCTAAATATACTCGGAATCTTGCTCCTGCAAGCCGAACTATCATGCTGTCAGGGCCAGCAGAACTTTACCAACAAGTGCTTGCCAAGGCTTTAGCCCACTACTTTGAGGCAAAGTTGCTTCTTTTAGATCTCACTGACTTTTCATTGAAGTTTTTATTGGAAGGGAAAATCCACAGGCAACACAGTGGAGTGGACCTCCGGTCAATGGAGCCGGGAGGATCTTGTAATCATCCTCAAATGCGTAGGAATTCGTCTGCGTCTGCAAATATCAGTAGCCTTGCTTTGCAAAGCAATCCTACAAATTCAGCCCCTCAGAAGAGCATAACCAACTGGCCTTTTGATGAAAAGCTTCTTTTACAAACCCTTTACAAGGTTCTAGTTTATGTGTCAAAAACCTACCCCATTGTTCTATATTTGCGGGATGTTGACAAGTTGTTGTGTAGATCACAACGGATATATAACTTATTCCAGAAAATGTTGAATAAACTACATGGACCAATTTTGATTCTTGGTTCACGAGTTTTGGATTCTGGTGGTGACTACAAAGAAGTGGATGACAGACTTTCTTCCGTCTTCCCCTACAACATTGAAATCAGCCCCCCAGAAGATGAATCTTATCTTGTCAGCTGGAAGTCTCAATTTGAAGAAGAGATGAAGATGATACAGATTCAGGATAATAGGAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGTTTGTGATGACCTGGGTTCCATGTGTGTGGCAGATACAATGGTTTTCAGTAACTATATAGAAGAGATCGTGGTGTCAGCAATTTCTTATCATTTAATGAATAACAAAGATCCTGACTACAGAAATGGCAAACTAGTTATTCCTTGCACCAGTTTGTCCCATGCATTGGGTATATTCCAAGAGGAGAAATTCAGTACAAGAGATACATTAAAATTAGAAGCCCAAGCAGTCACGTCTGAGCCCGGAGAAGAAGGAGCTGTTGTGAAACCAGAAACAAAGTCAGAAAATCCTGCTCCTGAAATTAAGGCTGATGCAGATACATCAACTTCAGTGGGGAAAATTGACGGTGAAAATGCAATTCCTCCACCAAAAGTTGAAGTTCCCCCAGACAATGAGTTTGAGAAGCGAATAAGGCCCGAGGTAATACCAGCAAACGAGATTGGTGTAAAATTCTCCGATGTTGGTGCCTTAGATGAGACCAAAGAATCGCTTCAAGAACTAGTTATGCTTCCTCTTCGAAGACCAGACCTCTTCCGCGGAGGCCTTCTTAAGCCTTGTAAAGGAATATTGCTTTTTGGACCTCCTGGCACGGGGAAGACAATGCTGGCAAAGGCCATTGCAAACGAAGCTGGAGCAAGTTTCATCAATGTATCCATGTCTACCGTCACCTCTAAATGGTTTGGTGAAGATGAGAAGAACGTTCGAGCCTTATTCACACTGGCAGCCAAGGTCTCTCCAACTATTATATTTGTTGATGAGGTTGATAGTATGCTGGGACAACGTACTAGAGTTGGAGAGCATGAAGCCATGCGGAAAATAAAGAATGAGTTTATGACACTTTGGGATGGACTAATGACAAATCCAGGGGAACGCATCCTTGTTCTTGCTGCAACCAATAGGCCGTTTGACCTAGATGAAGCAATAATTAGGAGATTTGAAAGGAGAATTATGGTGGGGATGCCATGCGTGGAGAACAGGGAAAAGATATTGAGGACTATATTGGCAAAAGAAAAGGTGGAGGAGAAACTTGATTTTAAGGAACTCGCAACTATGACAGAAGGATATAGCGGAAGTGATCTCAAGAACTTGTGCACAACTGCTGCTTACAGACCCGTCAGAGAGTTAATTCAGCAAGAGAGACTAAAAATGCTGGAGAAAAAGCAGAAAGGTATTGAAGAACAGAATAACAATGTCCAAGAAGTACAGGGAAATCACTCTACAGTAGGAAATACCCAAAATGCTTTGGAAGCAAAAGAGGAAGTTCAACAGGAAAGAGTAATTTCCCTTAGACCTTTGAACATGAAAGACTTCAAAGAGGCTAGGAGTCAGGTTTCCGCAAGCTACGCAGCTGAGGGGGCTGGAATGAGTGAGTTAAAGCAGTGGAATGAAATGTATGGGGAAGGCGGTTCAAGAAAGCGAGAGCAATTATCTTACTTCCTGTGA 2439 0.4297 MEQRNILLSALGVGVGVGVGIGLSAGQGFTKWGVNNSSSNGVTPENIEREMLRLVVDGRESKVTFDEFPFYLREQTRAMLTSAAYVHLKHAEISKYTRNLAPASRTIMLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKFLLEGKIHRQHSGVDLRSMEPGGSCNHPQMRRNSSASANISSLALQSNPTNSAPQKSITNWPFDEKLLLQTLYKVLVYVSKTYPIVLYLRDVDKLLCRSQRIYNLFQKMLNKLHGPILILGSRVLDSGGDYKEVDDRLSSVFPYNIEISPPEDESYLVSWKSQFEEEMKMIQIQDNRNHIMEVLAANDLVCDDLGSMCVADTMVFSNYIEEIVVSAISYHLMNNKDPDYRNGKLVIPCTSLSHALGIFQEEKFSTRDTLKLEAQAVTSEPGEEGAVVKPETKSENPAPEIKADADTSTSVGKIDGENAIPPPKVEVPPDNEFEKRIRPEVIPANEIGVKFSDVGALDETKESLQELVMLPLRRPDLFRGGLLKPCKGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTVTSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTLWDGLMTNPGERILVLAATNRPFDLDEAIIRRFERRIMVGMPCVENREKILRTILAKEKVEEKLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQERLKMLEKKQKGIEEQNNNVQEVQGNHSTVGNTQNALEAKEEVQQERVISLRPLNMKDFKEARSQVSASYAAEGAGMSELKQWNEMYGEGGSRKREQLSYFL 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00272 812 MobiDBLite consensus disorder prediction 408 462 - -
Spst2g00272 812 Pfam ATPase family associated with various cellular activities (AAA) 521 651 IPR003959 GO:0005524|GO:0016887
Spst2g00272 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 481 720 IPR027417 -
Spst2g00272 812 Coils Coil 713 736 - -
Spst2g00272 812 Gene3D - 480 652 IPR027417 -
Spst2g00272 812 Gene3D - 653 728 - -
Spst2g00272 812 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 46 811 - -
Spst2g00272 812 Pfam AAA+ lid domain 675 710 IPR041569 -
Spst2g00272 812 SMART AAA_5 517 654 IPR003593 GO:0016887
Spst2g00272 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 315 IPR027417 -
Spst2g00272 812 ProSitePatterns AAA-protein family signature. 624 643 IPR003960 GO:0005524|GO:0016887
Spst2g00272 812 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 480 655 - -
Spst2g00272 812 MobiDBLite consensus disorder prediction 418 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00272 Spst-Chr2 2049368 2054692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00272 481 715 Calmodulin-binding Proteins AT3G56690 38.655 8.97e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00272 - - gmx:100808011 1310.82