Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00259 ATGCAACGCATTTTGTGCTTCATCTCCTTGCTTTCTCTCACCCTCTTCCAACCAAATGCAGAACCCACAGAGGACAAGCAAGCACTGCTTCACTTAGTGGAAAAGTTGCCTCCTTCACGACCCCTCAATTGGAACGCAACCTCTTCTCCATGTACCTCTTGGACCGGTGTAACCTGTAACCATGACCACTCACGAGTTATAGCCATTCACTTACCTGGCCTAGGCTTTCATGGAACCATTCCTCCCAATACGTTAAGCCGCGTTACGTGCCTGCAAACATTGAGTCTCAGATCCAACTTCATTACTGGTCCTTTCCCTTCTGATTTTTCCAATCTCACTGAACTTTCCTTTCTCTACCTTCAGTTCAACAATTTCTCTGGTCCATTACCCGACTTCTCTGCCTGGAAGAACCTCTCTGTTGTGAACCTCTCCAATAATTGTTTCACTGGCACCATTCCTCTCTCCCTTTCCGATTTGACTCACCTGACTGCCATCAACCTCGCCAACAACTCGCTTTCGGGCCAAATCCCTCTCTCTCTCCGCAGGTTTCCCAACTCGGCTTTCGTAGGAAACAATGTCTCTCTCGAAACCATTTCACATTCTAAATCTGCCAAGCACGGCGAAACGGCGCTGTTTTGGGTTGCTGTTGCTGCTGCTCCTGTTGCTCTTGCAGCGTTCTTTGTTTTTATCTTTGTGTGCTGGTCGAGAAAGAAGAGCAGAGATTCCTTTGCTCGGAATTTGCAGAAGGGAGATATGTCTCCCGAAAAAGTAGTGTCGAGGGACCTTGATGCGAATAATAAAATATTTTTCTTTGAGGGGTGTAGCTATGCGTTTGACTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTATTGGGGAAGGGGACGTTTGGTGCTGCGTATAAGGCTGCGTTAGAGGATGCTACCACTGTTGTTGTGAAGAGGTTGAAGGAAGTGGCAGTTGGAAAGAGAGATTTTGAGCAGCACATGGAGGTTGTTGGGAATCTGAAACATGAGAATGTGGTTCAGCTAAAGGGGTATTACTATTCCAAAGATGAGAAACTCATGGTCTATGATTACTACGTTCAAGGGAGTCTCTCTGCTTTGTTGCATGGTAAAAGAGGAGAGGATAGGGTGCCTTTAGATTGGGAGACTCGAATGAAAATTGCTTTGGGTGCTGCACGAGGCCTTACTCGCATCCATTTCGAGAATGGGGGGAAACTTGTACATGGCAATATCAGATCCTCAAATATATTTATGAATACTAAACAATATGGTTGTATATCTGATCTTGGCCTGGCAACCATAATGAGTTCAGTTGCCATACCCATCTCACGAGCTGCTGGTTACAGAGCACCTGAAGTTACAGACACTAGGAAAGCAACGCAATCTTCTGATGTTTACAGCTTTGGTGTGGTGTTACTGGAGCTTCTCACTGGGAAATCCCCTGTGTACACAGCTGGTGGCGATGAGATTGTGCACTTGGTGAGATGGGTTCATTCGGTTGTAAGAGAGGAGTGGACAGCAGAAGTTTTTGACTTGGAGTTGATCAGATATCCTAACATAGAGGAAGAGATGGTGGAAATGTTACAGATAGCCTTGTCATGCGTGGTCAGGGTTCCTGATCAGAGGCCTAAGATGTCGGAAGTTGTAAAAATGATAGAAAATGTGAGGCAGATTGATTCAGTAGTGAATCAGCAACCTTCATCTGAGAACCAAGCCAACCCTTTACCACTTAGCATCACTTCCTCTTAA 1752 0.4578 MQRILCFISLLSLTLFQPNAEPTEDKQALLHLVEKLPPSRPLNWNATSSPCTSWTGVTCNHDHSRVIAIHLPGLGFHGTIPPNTLSRVTCLQTLSLRSNFITGPFPSDFSNLTELSFLYLQFNNFSGPLPDFSAWKNLSVVNLSNNCFTGTIPLSLSDLTHLTAINLANNSLSGQIPLSLRRFPNSAFVGNNVSLETISHSKSAKHGETALFWVAVAAAPVALAAFFVFIFVCWSRKKSRDSFARNLQKGDMSPEKVVSRDLDANNKIFFFEGCSYAFDLEDLLRASAEVLGKGTFGAAYKAALEDATTVVVKRLKEVAVGKRDFEQHMEVVGNLKHENVVQLKGYYYSKDEKLMVYDYYVQGSLSALLHGKRGEDRVPLDWETRMKIALGAARGLTRIHFENGGKLVHGNIRSSNIFMNTKQYGCISDLGLATIMSSVAIPISRAAGYRAPEVTDTRKATQSSDVYSFGVVLLELLTGKSPVYTAGGDEIVHLVRWVHSVVREEWTAEVFDLELIRYPNIEEEMVEMLQIALSCVVRVPDQRPKMSEVVKMIENVRQIDSVVNQQPSSENQANPLPLSITSS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00259 583 ProSiteProfiles Protein kinase domain profile. 285 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00259 583 PANTHER OS05G0588300 PROTEIN 4 569 - -
Spst2g00259 583 Gene3D Ribonuclease Inhibitor 22 203 IPR032675 -
Spst2g00259 583 Gene3D Transferase(Phosphotransferase) domain 1 361 574 - -
Spst2g00259 583 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 360 567 - -
Spst2g00259 583 ProSitePatterns Protein kinases ATP-binding region signature. 291 322 IPR017441 GO:0005524
Spst2g00259 583 FunFam Probable inactive receptor kinase RLK902 22 180 - -
Spst2g00259 583 FunFam pollen receptor-like kinase 1 254 359 - -
Spst2g00259 583 Gene3D Phosphorylase Kinase; domain 1 254 359 - -
Spst2g00259 583 MobiDBLite consensus disorder prediction 564 583 - -
Spst2g00259 583 SUPERFAMILY Protein kinase-like (PK-like) 289 553 IPR011009 -
Spst2g00259 583 Pfam Leucine rich repeat N-terminal domain 23 60 IPR013210 -
Spst2g00259 583 SUPERFAMILY L domain-like 35 196 - -
Spst2g00259 583 Pfam Protein tyrosine and serine/threonine kinase 289 552 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00259 Spst-Chr2 1979841 1982241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00259 15 574 Receptor kinase-like Gene Family AT4G23740 60.131 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst2g00259 PK_Tyr_Ser-Thr 6.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00259 - - vun:114171626 1018.07