Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00244 ATGGACTCACTACTGCAGGGGATATTATCTTCTTATGACAAGGCTTTGCTAATTCTAAGATGGAATGCACCAATTTCAAAGTCACAACCCATGCATCAACCAACTCAAACTTCGTCACCACAGTCCCCGGTATCCGTTGACCAAAGTCCTCCGAGGAAGGACCATGAAGGTGCCCGCAAGGATCATCAAGAACTAAAACAAAATGTAAAGAAAAGAAAGACGATGCCCAAATGGACGGAACAGGTTAGAGTGACTATCGAGAATGGGGTTGAAGGAGCTGCTGGAGATGGTTACAGCTGGAGAAAATATGGACAGAAAGAGATCCTCGGTGCAAAATATCCCAGGTGCACATTCCGCAAAACTCAGGGCTGCTGCGCCACGAAGCAAGTGCAGAGATCAGAAGAAGACCCCACTGTCTTTGACATAACTTATCGAGGAAGCCACACCTGTTCTAAGGGAACCAGTGCCGTTCTGTCACAAAAATCAGCAGACACAGAGGAGAAACCGCAAGCTTATGACAGTATTCAGTTTCACCATGCACAGTCATCGCAAGAAACACTTACAGAGCACACAAACACTTTGACTGTGGAAACGGATAACATAACACCACATCCATTCCCTTCGTTTGGATGCATGACACAAGCTAACCACCACGCGCTTCTTCCCTCTTTGGTGCTAGAGAATGATCCCTTTTTCAGCACCATTTCCCAAACATCCTTGTTTTCTCCGAACACACCTGAATCAAATTATTTTGTGTCTCCGTCTGTCCTCGTACACGATGAATTCGACAGGGTCTGTGACAAGCCGTACCCCGATTCTGATGCCGCCGGGGTCGTTTCATCTGATACATCAACCATCAATTCTCCATTTTTTGACTTCAATTTCTCACTCGATGCATTGGGAATTGATGCAAACTTCCCCTTCAATGCCTCGGGGTTTCATCCTAACTGCACTTGA 957 0.4608 MDSLLQGILSSYDKALLILRWNAPISKSQPMHQPTQTSSPQSPVSVDQSPPRKDHEGARKDHQELKQNVKKRKTMPKWTEQVRVTIENGVEGAAGDGYSWRKYGQKEILGAKYPRCTFRKTQGCCATKQVQRSEEDPTVFDITYRGSHTCSKGTSAVLSQKSADTEEKPQAYDSIQFHHAQSSQETLTEHTNTLTVETDNITPHPFPSFGCMTQANHHALLPSLVLENDPFFSTISQTSLFSPNTPESNYFVSPSVLVHDEFDRVCDKPYPDSDAAGVVSSDTSTINSPFFDFNFSLDALGIDANFPFNASGFHPNCT 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00244 318 SUPERFAMILY WRKY DNA-binding domain 94 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst2g00244 318 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 211 IPR044810 GO:0003700
Spst2g00244 318 SMART WRKY_cls 94 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst2g00244 318 MobiDBLite consensus disorder prediction 28 76 - -
Spst2g00244 318 ProSiteProfiles WRKY domain profile. 89 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst2g00244 318 MobiDBLite consensus disorder prediction 49 76 - -
Spst2g00244 318 Gene3D WRKY domain 79 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst2g00244 318 MobiDBLite consensus disorder prediction 28 48 - -
Spst2g00244 318 Pfam WRKY DNA -binding domain 96 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00244 Spst-Chr2 1904439 1905579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00244 30 307 WRKY Transcription Factor Family AT4G11070 36.396 3.36e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst2g00244 WRKY 4.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00244 - - vun:114174666 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00244 2 1904439 1905579 Spst2g00244 2 1904439 1905579 ECH
Spst2g00244 2 1904439 1905579 Spst4g01947 4 60130676 60132693 ECH
Spst2g00244 2 1904439 1905579 Spst3g01020 3 13560980 13562254 PCT