Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00241 ATGGAGGGAATGCAAGAAAGAGATTCACAGCTTGGTAGGGATATTGGTTCCTCCTTATCAAAGCTGATACTAACAAGTGGGTCGAACACGCTGGACTCAATTTTCTCGAATTGTCCCCCAACAAACGCCACAACGAGCAACTCCGTGTTGGATTATTTAGAACCCTTTGGGTCGGCGGGGTTTGAGCCTCTGGGGTCTTCGGTCTACCTTCGCCAAAGGGACATCCTCCAAAAGTTCTACCAAGAAAGCCGAGGGAACGGGAACGGGTCTTTTGTTCCCACCTCCTTGGCAACCCCATCTATAAACTCTGTTTACACGACTTCGTTGACTTCTTCTTTGACCAACCCTTGCAAGAAGAAGCTCTACAGGGGAGTGAGACAGAGACATTGGGGCAAATGGGTCGCCGAAATTAGACTCCCCCAGAACAGGATGAGAGTGTGGTTGGGCACCTACGACACTGCCGAAGCCGCTGCCTACGCCTACGACCGCGCCGCGTATAAGCTACGTGGAGAGTACGCGCGTTTGAACTTCCCCAATTTGAAGGACCCCACCAAATTGGGGTTCGGAGATTCCGCCAGATTGAACGCCTTGAAGAGCTCCGTCGACGCCAAAATCCAAGCCATATGCCAGAAGGTGAAAAGGGAGAGAGCCAAAAAGAGTGCCGCCAAGAAGCTCAGTTCCGCCACCGCTCACACCAATCGCAAGCAGAGCGACAATATCAATTCCTCCGCTTCCTCCTCGTCCTCGCTGCCGCTGTCACCGTCCTCCATTTTTTACGACAATTGGGCCAACGAGTTGTTTTCGCCGACCGTTTCGGAGGACGGGATTTGGAAGGGGGAGAACTCGCCAGCCTCGGTTTCCACGGAATGTCCAACCATGATGGTTACAGAAGAAACAGAGTTCGAAGGTTGTTCTTTGGCGAGGTTGCCTTCTTTCGATCCCGAGTTGATTTGGGAAGTTCTGGCCGTTTAA 972 0.5216 MEGMQERDSQLGRDIGSSLSKLILTSGSNTLDSIFSNCPPTNATTSNSVLDYLEPFGSAGFEPLGSSVYLRQRDILQKFYQESRGNGNGSFVPTSLATPSINSVYTTSLTSSLTNPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPTKLGFGDSARLNALKSSVDAKIQAICQKVKRERAKKSAAKKLSSATAHTNRKQSDNINSSASSSSSLPLSPSSIFYDNWANELFSPTVSEDGIWKGENSPASVSTECPTMMVTEETEFEGCSLARLPSFDPELIWEVLAV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00241 323 Gene3D AP2/ERF domain 121 179 IPR036955 GO:0003700|GO:0006355
Spst2g00241 323 ProSiteProfiles AP2/ERF domain profile. 121 178 IPR001471 GO:0003700|GO:0006355
Spst2g00241 323 MobiDBLite consensus disorder prediction 220 251 - -
Spst2g00241 323 SMART rav1_2 121 184 IPR001471 GO:0003700|GO:0006355
Spst2g00241 323 SUPERFAMILY DNA-binding domain 121 178 IPR016177 GO:0003677
Spst2g00241 323 PRINTS Ethylene responsive element binding protein signature 144 160 IPR001471 GO:0003700|GO:0006355
Spst2g00241 323 PRINTS Ethylene responsive element binding protein signature 122 133 IPR001471 GO:0003700|GO:0006355
Spst2g00241 323 MobiDBLite consensus disorder prediction 225 251 - -
Spst2g00241 323 Pfam AP2 domain 122 171 IPR001471 GO:0003700|GO:0006355
Spst2g00241 323 FunFam Ethylene-responsive transcription factor 2 120 179 - -
Spst2g00241 323 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 35 321 - -
Spst2g00241 323 CDD AP2 120 180 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00241 Spst-Chr2 1888174 1889145 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00241 14 322 AP2-EREBP Transcription Factor Family AT1G64380 47.399 7.87e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst2g00241 AP2 6.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00241 - - gmx:100785364 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00241 2 1888174 1889145 Spst2g00241 2 1888174 1889145 ECH