Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00239 ATGGAAGAATCCAAACCGGCCACCTCCTCCTCCTCCTCCGCAACACACGGTTTCATATCCGTGATCGGGCGGCGGCGCACAATGGAGGACGCGGTCATGGTGGTTCCCGGTTTGGTGGCGGCGGGTAAGTGGTGTGGCGGTTATGATTTCTTCGCGGTTTACGACGGGCACGGCGGAACGCTGGTGGCCAACGCTTGCCGCGACAGGCTGCACCTGCTGTTGGCGGACGAGTTGAGGGAGAGCGCGGAGAAGGGATTGGATTGGTGCGAGGTGATGTGTTCGTGCTTCATGAAGATGGACAAGGAGATCGGAGTTGGTGGTGAGGGCGATGAGGCGCACGACGACGGTGGCGGGAACACGATGGGTTCGACCGCGGCGGTGGTGGTGGTTGGCAAGGAGGAGATTGTGGTGGCGAATTGTGGAGACTCGAGGGCGGTGTTGTGCCGTGGCGGTGTAGCTGTTCCACTTTCACGTGATCACAAGCCTGATCGTCCAGATGAAAGAGAGAGGATAGAAGCCGCTGGTGGGAGAGTGATTAATTGGAACGGAAGTCGTGTGTTGGGAGTACTTGCTACTTCCAGATCCATTGGGAAGATTTCACACGATGCAGGGGATCACTGCATGAAACCTTTTGTGATATCTCAACCAGAGACCCAAGTGTACGCACGAACAGAGTCAGATGAGTTTGTGGTGGTGGCGAGTGACGGGTTATGGGATGTGGTGTCTAACAAGTTTGTTTGTGAGGTGGTACGAGGTTGCCTCCATGGCCATATGAAGAGGAATTTAAAAGAGGACACGATTATAAGCTACGCAACAGAAGCTGCATCCATGTTAGCAGAGTTGGCCATGGCTCGTGGAAGCAAAGACAACATCAGTGTTATAGTCATCCAACTCAACACCACCTCTGCTTGA 912 0.5461 MEESKPATSSSSSATHGFISVIGRRRTMEDAVMVVPGLVAAGKWCGGYDFFAVYDGHGGTLVANACRDRLHLLLADELRESAEKGLDWCEVMCSCFMKMDKEIGVGGEGDEAHDDGGGNTMGSTAAVVVVGKEEIVVANCGDSRAVLCRGGVAVPLSRDHKPDRPDERERIEAAGGRVINWNGSRVLGVLATSRSIGKISHDAGDHCMKPFVISQPETQVYARTESDEFVVVASDGLWDVVSNKFVCEVVRGCLHGHMKRNLKEDTIISYATEAASMLAELAMARGSKDNISVIVIQLNTTSA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00239 303 PANTHER PROTEIN PHOSPHATASE 10 297 IPR015655 GO:0004722|GO:0006470
Spst2g00239 303 FunFam Protein phosphatase 2C 51 8 303 - -
Spst2g00239 303 Gene3D - 4 302 IPR036457 -
Spst2g00239 303 CDD PP2Cc 16 298 IPR001932 -
Spst2g00239 303 ProSitePatterns PPM-type phosphatase domain signature. 50 58 IPR000222 GO:0043169
Spst2g00239 303 ProSiteProfiles PPM-type phosphatase domain profile. 15 298 IPR001932 -
Spst2g00239 303 SUPERFAMILY PP2C-like 12 299 IPR036457 -
Spst2g00239 303 SMART PP2C_4 5 296 IPR001932 -
Spst2g00239 303 Pfam Protein phosphatase 2C 17 291 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00239 Spst-Chr2 1870345 1871466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00239 12 298 PP2C-type Phosphatase Gene Family AT2G29380 48.475 1.55e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00239 K14497 - gmx:100785905 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00239 2 1870345 1871466 Spst2g00239 2 1870345 1871466 ECH