Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00220 ATGTTTCAAGAAGAAGGGTCATCTTCTGTAACTTCTTCACCTCTTCAGTTCTTTTCCATGATGTCTCTTTCACCTGGCATAGGATCTCCCTATCCTTGGCTTAGAGAACTGAAATCTGAGGAAAGGGGTTTGTATTTGATCCATTTGTTGATCGGTTGTGCAAATCATGTGGCTAATGGTAGTCTTGAAAATGCAAACGTGTTACTTGAGCAGATTTCTCAGCTTGCCTCGCCTGACGGGGATACTATACAGCGAGTTGCTGCATATTTCACCGAAGCACTCGCTGATAGGATACTGAAAACATGGCCGGGCCTCCACAGGGCTCTCAATTCCACCAGAATAGCTATGGTGTCTGAAGAAATTATTGTTCAGAAGCTCTTCTTTGACCTTTTCCCGTTCTTGAAGATGTCATATATTCTGACAAATCAGACTATTGTTGAAGCCATGGAAGGGGAGAAAATGGTGCATATCATTGATCTCAATGCGGCCTGGCCGGCGCAGTGGGTTGCTCTCCTCCATGTTCTGAGTGCACGCCCTGAAGGTCCTCCCCATTTGAGAATTACTGGGGTGCATCACCACAAAGAGGTTTTGGATCAGATGGCTCATAAACTCACTGAAGAGGCAGAAAAGTTGGATATCGCATTCCAATTCAACCCTATGGTAAGCAAGATAGAAAATCTAGATTTTGACAAACTTCGCGTAAAAACTGGGGAGGCACTAGCAATAAGTTCTATTCTGCAGTTACACTCCCTTCTGGCCTTGGATGATGATGCCTCGAGGAGAAGATCTCCTCTTCCGTCAAACAATTCAAATGCAATTCACCTGCAGAAAATCCTGCAGATGAACCCAAACACACGCGGTGACTTGGTTGAAAAGGATATGGTTCATGGCTATAGCCCAAGTCCAGATTCAGCCTCAGCCTCGTCCTCCCCCGGTTCTTCATATGCGTCAATGAAGTCGGAGAGCTTTCTCAATGCCTTGTGGGGGCTATCACCAAAGGTCATGGTTGTGACTGAGCAAGACTTCAATCACAACAGTTCAAACCTGATGGACAGGCTGCTAGAATCTCTAAACTCTTATGCTGCTTTGTTTGACTGTTTGGAATGCTCTGTCTCTAGAGCATCCTTGGACAGAATCAAGATCGAGAAGATGCTCTTAGGTGAGGAAATCAAGAACATCGTAGCTTGTGAGGGAGCTGAAAGAAGGGAAAGGCATGAAAAGATGGATAAGTGGATCCAGAGACTTGATCTATCCGGCTTTGCAAACATGCCTTTAAGCTGTCAAGGTATTGTGCAGGCAATGAGGTTCTTGGAGAGCTATGGTTGTAATGGGTATAGGATGAGGGAGGAAAATGGTTGTGTAGTGATTTACTGGCAGGACCGTACCTTGTTTTCTGTGACAGCTTGGAGATCAAGGAGGTAA 1422 0.4522 MFQEEGSSSVTSSPLQFFSMMSLSPGIGSPYPWLRELKSEERGLYLIHLLIGCANHVANGSLENANVLLEQISQLASPDGDTIQRVAAYFTEALADRILKTWPGLHRALNSTRIAMVSEEIIVQKLFFDLFPFLKMSYILTNQTIVEAMEGEKMVHIIDLNAAWPAQWVALLHVLSARPEGPPHLRITGVHHHKEVLDQMAHKLTEEAEKLDIAFQFNPMVSKIENLDFDKLRVKTGEALAISSILQLHSLLALDDDASRRRSPLPSNNSNAIHLQKILQMNPNTRGDLVEKDMVHGYSPSPDSASASSSPGSSYASMKSESFLNALWGLSPKVMVVTEQDFNHNSSNLMDRLLESLNSYAALFDCLECSVSRASLDRIKIEKMLLGEEIKNIVACEGAERRERHEKMDKWIQRLDLSGFANMPLSCQGIVQAMRFLESYGCNGYRMREENGCVVIYWQDRTLFSVTAWRSRR 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00220 473 Pfam GRAS domain family 46 470 IPR005202 -
Spst2g00220 473 ProSiteProfiles GRAS family profile. 37 470 IPR005202 -
Spst2g00220 473 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 42 466 IPR005202 -
Spst2g00220 473 MobiDBLite consensus disorder prediction 293 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00220 Spst-Chr2 1685848 1687269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00220 1 473 GRAS Transcription Factor Family AT1G50420 64.389 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst2g00220 GRAS 3.4e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00220 - - vun:114174232 776.933