Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00207 ATGGCTGAACCCCACATGAACTCGTTCACCGTTCCCTTAACACAAATGAGTCGGATTTCACCACTGCATGCAACAAGTCCAACCAGGGGCAACAAGCTTAAGGGTGTTCGCCGTCGCAAATGGGGCAAGTGGGTGTCGGAGATTCGAGTTCCGGGCACACAAGAGCGTCTCTGGCTGGGAACCTACGCCACGCCGGAGGCTGCGGCGGTCGCTCACGACGTCGCCGTGTACTGTCTGAGGAGGCCTTCTTCCTTAGACAAACTTAACTTCCCCGAAACCTTGTCTTCTTACGGAGTTCAGCTGAGGGACATGTCTCCGAGGTCTGTTCAGAAGGTGGCTTCCGATGTTGGGATGGATGTTGACGCCAGAAACATTGCTGCTGGCAAAACTTCAACTGGGGTGGCACAAAGTTACGAGATTGAGAAGAAAATTGAGGAGAGGAATGATGTTGGTGGAGCAGGTGATGAGTCTTGGTGGGATGGTTTGGAGGGTGATGGTTGTGGGATCTGGCAAGGAAGTGGTGAAGATTGTAAAGAAAACGATGCCTTGAACATTTCCATCGAAGATTATCTTTAG 576 0.5156 MAEPHMNSFTVPLTQMSRISPLHATSPTRGNKLKGVRRRKWGKWVSEIRVPGTQERLWLGTYATPEAAAVAHDVAVYCLRRPSSLDKLNFPETLSSYGVQLRDMSPRSVQKVASDVGMDVDARNIAAGKTSTGVAQSYEIEKKIEERNDVGGAGDESWWDGLEGDGCGIWQGSGEDCKENDALNISIEDYL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00207 191 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 29 129 - -
Spst2g00207 191 ProSiteProfiles AP2/ERF domain profile. 32 91 IPR001471 GO:0003700|GO:0006355
Spst2g00207 191 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Spst2g00207 191 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Spst2g00207 191 CDD AP2 32 93 IPR001471 GO:0003700|GO:0006355
Spst2g00207 191 SMART rav1_2 32 97 IPR001471 GO:0003700|GO:0006355
Spst2g00207 191 SUPERFAMILY DNA-binding domain 32 91 IPR016177 GO:0003677
Spst2g00207 191 Gene3D AP2/ERF domain 32 93 IPR036955 GO:0003700|GO:0006355
Spst2g00207 191 Pfam AP2 domain 32 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00207 Spst-Chr2 1581999 1583725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00207 25 191 AP2-EREBP Transcription Factor Family AT1G71520 45.562 1.13e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Spst2g00207 AP2 6.4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00207 - - gmx:100816257 236.498