Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00163 ATGGACCCTTTTGATGATTTTCTACCTATGGCTCCTGTTGCACGCACTCGTCCGGGCGCCAAGTTTGTTCCAAAGGCCAAACCGAAACAGCGGCTTCCAAAGGATGTACCTGCATCGGAACAAGCTACCTCGTCTAAAGATGGAGTTTCTGAGAATGAATGTCAAAATGCAATTGCTTCAGCATTAAGTGTGCCAGTGGACGAATCTATGGGATCCATTCATCATATGCTGGTAGAATTTCCAAATTCTGAAACGGGAAATCCTAAACAATTTAGAGTCGAGGGAGATAGTGCAGCCTTGGTGGATGATTGCTCGATCACAGCATCTGCAGTTGATGCTCATCAGAATTCTAAAATCTTTTTAGAATCAGCATGTGAGGCTGATCCAGTAGATTATAATGGGGACTTGACTTGCTTCGTTTCTGAGACCAACCTCGATAATGGTAAGTTTTGTGTTTACATTGCTTGCACAACACAACCAGTTCACCCTAATGTTGTAGAAAACGAATTGAATAATGTGGCTGCTCCATTTACAACTTGCTCAACCATTGATAGGATCAAAGAACCACCTAAAAATGGGGAAGGTTCAGTTATTGATAGCAATCAATGCTTGCCACTTAATGACAACTCATTACAAGTTGGCACGGATTTGGGCTTCAATAGTGTTTCAGATAATAACGTTGCAATGATTCAGACGGTTGATTCAAATTCAAACTTTGGAAAAAGAGAAGAGGTAGTATCTGCAGAAATTGAATTGGATCCTTTTAATGACATCCTCCCTGATGCTCCTGCTAGGAATGTTCATAAATTTAAACCCAAGATTAAGCCACGACCTAGAGTAGGCAATTGGCCTGGAATTACATCTGCTTCATCTAAAGTTATGATGGAAAAACATGTTGAGTTACCTACTTCATGCACAAACGACTTTCAATCTTTTAAGTCTAGTTGTGTGCTAAACCAATCAACCAGTTTACCTTTGCCAACATCAGAGATTGTTAGGACAAATGATGTACCTCATAAGTTTGATGATTCAAGCTCAAATATTCCAATATCTGAAGACAGTAATAGTTTGGCAGCAGCAATTCCTTCCCAATTGGATTCCCTAAATGCTATGCTTTCAGAGAATGCAGTTCATAATGGTACTAGAGATTGGCATTCTAGCTTTGGTAAATCATCTGGAGAGGCTGCAGATATTTTTTCTGGGTTGGAATCTCTTGATGACTTTCTCACCCAACCTGCCACTGATACAGGAAAACCAGCTCTTCATTCTTTCAATGAAAAGGCTGCAGAGGAAAATTTTGTCACACCTGGTTGTAGTTCTATTAACTCTTTTGGCGAATGTGATACTATCCAAAGATGTCCTGAATATCATACACCACAAGATCCATTAACCTTCAAGAAAGCTGCTGTCGTCAATGAGAATGATACTCACACTAACAGTAGAATGTTGGAAACAGAGGATATTGTGGACATGAATCCTACCTGTCCAGGGGATGATGTCTTTGATTATCAATCCATGAAATCAGGCGAAGAACCAACTTCTGGAATTCCAGTGCATGAAGAGTTGACAAATGCTGCAGCCAGTCCCAGATTGGCTGATTCTTTGCATGCAAATGCTACAAGGAAAAAAAAAGTAAATATCAGTTACTTTGACTTTAGTAAAAATGATGCCTCGGCCTCATGTTCTACAAGGAAGAACAAGAGATCTTCTATTGCTGGTGAGGAGGATAATAGTGGTAAAACGTCAAGACAACTCAGAAAACGAACAGCTCATAAACCTGAAAACAGCTCAATGAATGAGGATGTTGAAGACGATAATGACTTTGACCCTCCTTATCATTCTAATGAACATGAACTTCAAGAAAATGATGATGACTATGAAGTCAATAATTCATCCAAGAAGACAGGAGTATCAAAAAGTTCAAAGAAGAAATCTGTGGCTAAAGGTGGTAAAATGTCTCAAAAGCGTAAGAAGGCTGATGATGATGTACAAAAAACTAAGGAACTTCCTAAAAAGTTCTCTCATTCAACCCGACGAAAAAAAAGATGCGTGGACAAGGCTCTGCTTGAAATTCCTGAGGATGAACTAGATCCTCGAACATTGCCTATGAAGGATATTATTTTACTTGCAGAACATAGGGAGCGGCAAGCGAAAAAAGAGGCAATGACTTCAAATACATCTTCCACCAATCAAAGTGGTGGTGATTCTCTTCATGAGACTGGTGAGTATGATGAACAGGAGTTCTCAGGTTCAGAAGATGGTAGAGACCCATATGATGATCAAGGCAATGAAAGGATTACTTCATCTAACGTGTTATACAATTACCAGACTTTCATGCAAAAGACACCTAGGGGTAAATGGTCAAAACAAGATACTGAACTATTTTATGAGGCTATTAGGGAGTTGGGTACAGACTTTTCTATGATACAGCAGCTTTTCCCTGATAAAACTCGCAGTCAGATTAAGTCAAAATACAAGAAGGAAGAGCGGGAGCATTATTTACGGTTAAGAGATGCTATATATAACCGCACAAAAGATCACGTTCATTATAAATTGTTGATTGAGCGGCTACAAGCTTCCACCAAGGCAGAAGTAGACCCCAGTAGAGATGGCTCGGATTTCATAACTGCAGAGGAGGTTGTTGACCCAACAGCTGGGACTAAGGAAGAGGTTACGGAGGTTGCAACAACTAAGCAGGACCCCGACAAAGCACAGGAAGATTCTGTGGCAGTTCAGAGTCCAGAGCAATCTGATGAAAGTGAGGATGAATGGTCTCGATATAAAAGTTTCTATTAG 2796 0.4006 MDPFDDFLPMAPVARTRPGAKFVPKAKPKQRLPKDVPASEQATSSKDGVSENECQNAIASALSVPVDESMGSIHHMLVEFPNSETGNPKQFRVEGDSAALVDDCSITASAVDAHQNSKIFLESACEADPVDYNGDLTCFVSETNLDNGKFCVYIACTTQPVHPNVVENELNNVAAPFTTCSTIDRIKEPPKNGEGSVIDSNQCLPLNDNSLQVGTDLGFNSVSDNNVAMIQTVDSNSNFGKREEVVSAEIELDPFNDILPDAPARNVHKFKPKIKPRPRVGNWPGITSASSKVMMEKHVELPTSCTNDFQSFKSSCVLNQSTSLPLPTSEIVRTNDVPHKFDDSSSNIPISEDSNSLAAAIPSQLDSLNAMLSENAVHNGTRDWHSSFGKSSGEAADIFSGLESLDDFLTQPATDTGKPALHSFNEKAAEENFVTPGCSSINSFGECDTIQRCPEYHTPQDPLTFKKAAVVNENDTHTNSRMLETEDIVDMNPTCPGDDVFDYQSMKSGEEPTSGIPVHEELTNAAASPRLADSLHANATRKKKVNISYFDFSKNDASASCSTRKNKRSSIAGEEDNSGKTSRQLRKRTAHKPENSSMNEDVEDDNDFDPPYHSNEHELQENDDDYEVNNSSKKTGVSKSSKKKSVAKGGKMSQKRKKADDDVQKTKELPKKFSHSTRRKKRCVDKALLEIPEDELDPRTLPMKDIILLAEHRERQAKKEAMTSNTSSTNQSGGDSLHETGEYDEQEFSGSEDGRDPYDDQGNERITSSNVLYNYQTFMQKTPRGKWSKQDTELFYEAIRELGTDFSMIQQLFPDKTRSQIKSKYKKEEREHYLRLRDAIYNRTKDHVHYKLLIERLQASTKAEVDPSRDGSDFITAEEVVDPTAGTKEEVTEVATTKQDPDKAQEDSVAVQSPEQSDESEDEWSRYKSFY 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00163 931 CDD SANT 786 827 IPR001005 -
Spst2g00163 931 MobiDBLite consensus disorder prediction 861 931 - -
Spst2g00163 931 MobiDBLite consensus disorder prediction 862 876 - -
Spst2g00163 931 MobiDBLite consensus disorder prediction 738 762 - -
Spst2g00163 931 ProSiteProfiles SANT domain profile. 786 830 IPR017884 -
Spst2g00163 931 MobiDBLite consensus disorder prediction 721 737 - -
Spst2g00163 931 MobiDBLite consensus disorder prediction 18 52 - -
Spst2g00163 931 MobiDBLite consensus disorder prediction 568 599 - -
Spst2g00163 931 Pfam Myb DNA-binding like 777 860 IPR039467 -
Spst2g00163 931 MobiDBLite consensus disorder prediction 637 652 - -
Spst2g00163 931 MobiDBLite consensus disorder prediction 608 630 - -
Spst2g00163 931 MobiDBLite consensus disorder prediction 37 52 - -
Spst2g00163 931 MobiDBLite consensus disorder prediction 653 671 - -
Spst2g00163 931 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 17 931 - -
Spst2g00163 931 Gene3D - 787 851 - -
Spst2g00163 931 MobiDBLite consensus disorder prediction 716 764 - -
Spst2g00163 931 SUPERFAMILY Homeodomain-like 785 831 IPR009057 -
Spst2g00163 931 SMART sant 783 831 IPR001005 -
Spst2g00163 931 MobiDBLite consensus disorder prediction 557 684 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst2g00163 Myb_DNA-bind_7 9.1e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00163 K15198 - gmx:100792788 1159.05