Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00152 ATGGCTGCTTCGACTTCAGCCTCTCTCTCCGTCGTCGGAAGTGGCCTCGCCTTCCCCAACCATCGTCTTCATCCTCCCCCTGCCTCCTCGACTCGTTTACGCACTCGATTTCGTAACAACCGTTTGTTCCTATCTTCTCTCCCAAGGTATCACTGTTTCTCTCTATTTCTATTTCCGATGCTTCCAATTTCAAATTCCACCTATACTGTAGCTAATTCGTGTTTCCCTGTCGGTGAAAGAAGCAGGCACAAGGCTCTTTGTGGCGGATTGGGATTGCCGAGGAACAAGCCTCGAGGCCACGCTTTCGTCGTTGGTGAACCCCCGTTTTTGTTGCCGCAACAAACTTGTGCTTCTTGCTGTCTTGCCAGGAAACGCCGTTCCAATCTCGCAGCATTTGTGCCTGGAGCTTTTCTTGATAAATCTTATTTCCGCCTATCGAACAGTAAACTGCAGCGTTCTTCTGTTCAAATTCCGCGTGCCACTGTAGGTCCAGATGAGCCACATGCAGCTAGCACAACCTGGCCAGATGGTGTTTCCGAGAAGCAAGGTTTAAGTGTATATGATAGTGAACTAGAGCAGATAGAGGGGTTTCTAAGTTCTGAACTTCCATCTCACCCTAAGTTGCATCGTGGTCAACTGAAGAATGGGTTACGTTATCTGATTTTGCCAAATAAAGTTCCACCAAAAAGGCGAGCACACTTGGAAGTTCATGCAGGATCAATAGACGAGGAGGAGGATGAGCAAGGAATTGCACATATGATTGAACATGTTGCTTTCCTAGGAAGTAAAAAACGTGAGAAGCTTTTGGGAACAGGAGCCCGTTCAAATGCTTACACTGATTTCCACCATACAGTGTTTCACATCCATGCTCCTACAAGCACCAAGGATTCTGATGGGGATCTACTTCCACATGTTCTGGATGCCCTGAATGAGATAGCTTTCCACCCAAAGTTTCTTGCTTCTCGGATTGAAAAAGAACGGCGTGCTATACTATCAGAACTTCAAATGATGAATACAATAGAGTATCGAGTTGATTGCCAGTTGTTACAGCATCTGCATTCTGAAAATAAGCTGAGTAAAAGGTTTCCCATTGGATTAGAAGATCAGATAAAGAAATGGGATGCAGATAAAATAAGGAAGTTTCATGAGCGTTGGTATTTCCCTGCAAATGCTACCTTGTACATTGTGGGGGATATTGATAACATATCAAAGACTATTTACCAGATTGAAGCTGTTTTTGGACAAACTGGTGCAGACAGTGAGAAAGGTTCTGTACCCACTCCAAGTGCATTTGGTGCAATGGCTAGTTTTCTTGTTCCAAAGCTATCTGTTGGTTTGGGTGGAAATTCTGTCGAAAGGTCAGCCAATGCAGTGGATCAATCAAAAATATTCAATAAGGAAAGGCAAGCTGTTCGTCCTCCTGTGAAGCATAATTGGTCACTTCCTGGGAGTGGTGCTGACTTAAAGCCACCACAAATATTTCAACATGAGTTACTTCAAAACTTTTCAATTAATTTGTTCTGCAAGATACCAGTAAATAAGGTTCAAACATACAGAGACTTACGCCAGGTCTTGATGAAAAGAATATTTTTGTCTGCTCTTCATTTTCGAATTAATACAAGATATAAGAGTTCGAACCCACCGTTCACTTCAGTTGAATTGGATCACAGTGACTCTGGGAGGGAAGGATGCACTGTGACTACTCTTACCATAACAGCAGAGCCAAAGAATTGGCATAATGCAATTAGAGTTGCTGTTCAAGAGATTTTGGGTTGCATAGAGAAAACTATATTGCTTAAGGTTTCAAATAGCTTGAATGATAGCCTACCCTTAAGTCTTTCTATGATAAGAGTCTCTAATGTAATTTGTGTGATCCAGGTTCGGAGACTTAAAGAGTTTGGGGTTACCCAGGGTGAATTAACTCGTTACTTAGATGCCCTTCTGAAAGATAGTGAACACTTAGCAGCCATGATTGATAATGTATCTTCTGTTGATAACTTGGATTTTATCATGGAAAGTGATGCTCTTGGGCATAAAGTTATGGACCAGAGACAAGGGCATGAAAGTTTACTTGCTGTTGCTGGGACAGTTACCCTCGAGGAGGTCAATTCTGTTGGTGCCAAGGTGTTGCAATTTATAGCTGATTTTGCAAAGCCTACTGCACCGCTACCTGCAGCAATTGTTGCTTGTGTTCCAAAAAAAGTTCACATTGAGGGAGCTGGTGAAACAGAATTCAAGATATCATCAACTGAGACTACGGATGCTATCAAAGCTGGATTGGATGAACCTATTCAGCCAGAGCCTGAGCTTGAGGTGCCAAAAGAGCTGATACAATCATCCAAACTAGAGGAGTTGAAAAAACTGCGCAAGCCAGCCTTCATTCCTGTAAATCCCGAAACAGATGCTACAAAGCTTCTTGATGAGGAAACTGGGATCACCCAGCGCCGTCTTTCAAATGGAATTCCTGTTAACTATAAGATATCAAAAACTGAAACACAAAGTGGTGTGATGCGGCTGATTGTTGGTGGTGGACGAGCAGCTGAGAGTTCCGATGCAAGAGGATCTGTGATTGTGGGTGTGAGGACACTTAGTGAGGGAGGTCGTGTTGGTAACTTCTCAAGGGAACAGGTGGAACTTTTCTGTGTAAATCACCTTATAAATTGCTCCTTGGAATCTACGGAAGAATTCATTTCAATGGAATTCCGTTTTACTTTAAGAGACAATGGTATGCGTGCGGCCTTTCAATTGCTTCACATGGTGCTTGAGCATAGTGTCTGGGTTGACGATGCTTTTGATAGAGCAAGGCAATTGTATCTGTCATATTACCGGTCCATCCCCAAGAGCTTGGAACGCTCAACTGCTCACAAACTCATGGTAGCAATGTTGGATGGGGATGAGAGGTTTATTGAGCCTACGCCAAAATCACTGGAAAATTTAACCTTGCAATCTGTGAAGGATGCAGTGATGAATCAATTTTTTGGTGATAACATGGAGGTATGCATTGTAGGAGACTTCACTGAGGAGGACATTGAATCTTGCATTCTTGATTACCTTGGCACAGCTCAAGCCGCACGAATTCGTGAAAGGGAGCAAGAATTTAACCCACCCGTATTTCGATCATCTCCATCTGATTTGCAGTTTCAAGAAGTATTTTTAAAGGACACGGATGAGAGGGCATGTGCTTATATAGCTGGACCAGCACCAAACCGTTGGGGTTTTACTGTTGATGGAAAATATTTGTTAGAGTCCAATAATGATGCTTCAACAATCAATGATGATCAGTCAAATTCGGATGCCCAACTGACACAAGGTTTGCAAAAGAGCCTACGTGGTCATCCTCTTTTCTTTGGTATAACAATGGGACTGCTTTCTGAGATCATAAATTCTAGGCTCTTCACAACAGTCAGAGATTCTCTGGGATTGACATATGACGTGTCATTTGAATTAAACTTGTTTGACAGGCTTAAACTAGGATGGTATGTGATCTCTGTCACATCAACTCCGAGCAAGGTTCACAAAGCTGTTGATGCATGCAAAAATGTTCTTAGAGGTCTGCATAGCAACAAAATTACTGAGAGGGAATTGGACAGGGCTAAACGCACCCTTCTTATGAGACATGAAGCTGAAATTAAGTCGAATGCCTACTGGTTAGGGTTATTAGCTCATTTACAAGCTTCTTCTGTTCCAAGAAAGGACATATCATGTATCAAGGACCTAACATTTCTATATGAAGTTGCTACTATTGAGGATATATATATTGCATATGAACAGTTGAAAGTGGATGAGAATTCTCTATATTCATGCATTGGAATTGCTGGTTCTCAGGCTGCACAAGATATAGCAGGTGTAGGTTACAGAAAAATTTGCCGCATAGATTGTTTCCTTTCTTGCAAACTATTTGGCAGTGAGGGGGGTTACACTAATATGTGTCTCTCGAACAGGAGGCATGTCTGGAAGGTTGATTACGAATTGTGGTTGGAAGGATTAGCGGCATGTGTATCACAACACAAGAAGTTGCTGCTGCTGCATTCATTTAACATTGAAACAAGTGGAAAGGAAATGGGAGTAGTGATGATGAGAACACTAAGCAGTGACGAAAGTGGTTTGAAGAAGGGGCCATGGAGCCCAGAAGAGGATAAAATACTGGTAGATTACATTCAGAAGCATGGCCATGGGAGTTGGAGAGCCCTTCCAAAGCTTGCAGGATTGAACAGGTGTGGAAAGAGTTGCAGACTAAGGTGGACTAATTACCTCAGACCTGATATCAAAAGAGGGAAATTCTCTGATGAAGAAGAGCAACTCATCATCAATTTACATGCAGTTCTTGGGAATAAGTGGGCAGCTATAGCATCTCATCTTCCAGGTAGAACTGATAATGAAATAAAGAATTTGTGGAACACACATTTAAAGAAAAAGCTTCTGCAAATGGGGTTAGACCCAGTGACTCACCGTCCAAGAACTGATCACCTAAACCTTCTTTCCAATCTACAACAGATATTGACAGCAGCGAAAATCGTGAGCAGTTTCACAAACCCTTGTGACATAAACAATGCTCTAAGGCTACACTCAGATGCCACACAACTAGCCAAATTACAATCATTGCAAAACATGTTTCAAGTCATAGCTGCCACTCCTTCTCCTGCCTCAAACTCTAACCCGCTCAACCCTTTTTTACCATTAAACTCACTGCCAGATAATTTTCTAAATGATGTTTTGGGGTTGAATCACTCTAATTATCTCCAAAACCTTTATGATGGTAATTCACTTTCTCAAATCCACCCCAATTTCCAAAACTTTGAGAGCCCTCAGCAGCCAACACAAGGTTCCATAAATGCTGACCCTTCACCATCAAATTCGCTTCCAAATCTGGTTTCTGCCTCACCTGAACGTTCCCCAGTGAAGGAAGCAGAAAACGTTAATGTAGACTCAAAGGAGTGTTCCAACCCTTCTTCCACCACCTTTGAGTTAACGTGGGGAGATTTCATGGATGAGGATGCAACCGAAACTTATTGGAAAGGTTTGATAGAAATTGCGGAGCATATTCTAACTTCAATTACAAAAGTTAACCCTCTTCAAGTAAGGATTTTTGCTGCGTGA 5097 0.4224 MAASTSASLSVVGSGLAFPNHRLHPPPASSTRLRTRFRNNRLFLSSLPRYHCFSLFLFPMLPISNSTYTVANSCFPVGERSRHKALCGGLGLPRNKPRGHAFVVGEPPFLLPQQTCASCCLARKRRSNLAAFVPGAFLDKSYFRLSNSKLQRSSVQIPRATVGPDEPHAASTTWPDGVSEKQGLSVYDSELEQIEGFLSSELPSHPKLHRGQLKNGLRYLILPNKVPPKRRAHLEVHAGSIDEEEDEQGIAHMIEHVAFLGSKKREKLLGTGARSNAYTDFHHTVFHIHAPTSTKDSDGDLLPHVLDALNEIAFHPKFLASRIEKERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSKRFPIGLEDQIKKWDADKIRKFHERWYFPANATLYIVGDIDNISKTIYQIEAVFGQTGADSEKGSVPTPSAFGAMASFLVPKLSVGLGGNSVERSANAVDQSKIFNKERQAVRPPVKHNWSLPGSGADLKPPQIFQHELLQNFSINLFCKIPVNKVQTYRDLRQVLMKRIFLSALHFRINTRYKSSNPPFTSVELDHSDSGREGCTVTTLTITAEPKNWHNAIRVAVQEILGCIEKTILLKVSNSLNDSLPLSLSMIRVSNVICVIQVRRLKEFGVTQGELTRYLDALLKDSEHLAAMIDNVSSVDNLDFIMESDALGHKVMDQRQGHESLLAVAGTVTLEEVNSVGAKVLQFIADFAKPTAPLPAAIVACVPKKVHIEGAGETEFKISSTETTDAIKAGLDEPIQPEPELEVPKELIQSSKLEELKKLRKPAFIPVNPETDATKLLDEETGITQRRLSNGIPVNYKISKTETQSGVMRLIVGGGRAAESSDARGSVIVGVRTLSEGGRVGNFSREQVELFCVNHLINCSLESTEEFISMEFRFTLRDNGMRAAFQLLHMVLEHSVWVDDAFDRARQLYLSYYRSIPKSLERSTAHKLMVAMLDGDERFIEPTPKSLENLTLQSVKDAVMNQFFGDNMEVCIVGDFTEEDIESCILDYLGTAQAARIREREQEFNPPVFRSSPSDLQFQEVFLKDTDERACAYIAGPAPNRWGFTVDGKYLLESNNDASTINDDQSNSDAQLTQGLQKSLRGHPLFFGITMGLLSEIINSRLFTTVRDSLGLTYDVSFELNLFDRLKLGWYVISVTSTPSKVHKAVDACKNVLRGLHSNKITERELDRAKRTLLMRHEAEIKSNAYWLGLLAHLQASSVPRKDISCIKDLTFLYEVATIEDIYIAYEQLKVDENSLYSCIGIAGSQAAQDIAGVGYRKICRIDCFLSCKLFGSEGGYTNMCLSNRRHVWKVDYELWLEGLAACVSQHKKLLLLHSFNIETSGKEMGVVMMRTLSSDESGLKKGPWSPEEDKILVDYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSDEEEQLIINLHAVLGNKWAAIASHLPGRTDNEIKNLWNTHLKKKLLQMGLDPVTHRPRTDHLNLLSNLQQILTAAKIVSSFTNPCDINNALRLHSDATQLAKLQSLQNMFQVIAATPSPASNSNPLNPFLPLNSLPDNFLNDVLGLNHSNYLQNLYDGNSLSQIHPNFQNFESPQQPTQGSINADPSPSNSLPNLVSASPERSPVKEAENVNVDSKECSNPSSTTFELTWGDFMDEDATETYWKGLIEIAEHILTSITKVNPLQVRIFAA 1698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00152 1698 Gene3D - 1370 1423 - -
Spst2g00152 1698 Gene3D - 814 1024 - -
Spst2g00152 1698 SUPERFAMILY LuxS/MPP-like metallohydrolase 804 1022 IPR011249 GO:0046872
Spst2g00152 1698 ProSiteProfiles Myb-like domain profile. 1366 1418 IPR001005 -
Spst2g00152 1698 SUPERFAMILY Homeodomain-like 1368 1465 IPR009057 -
Spst2g00152 1698 FunFam Transcription factor MYB39 1426 1487 - -
Spst2g00152 1698 SUPERFAMILY LuxS/MPP-like metallohydrolase 205 406 IPR011249 GO:0046872
Spst2g00152 1698 FunFam Stromal processing peptidase, chloroplastic 1099 1265 - -
Spst2g00152 1698 ProSiteProfiles Myb-like domain profile. 1419 1469 IPR001005 -
Spst2g00152 1698 MobiDBLite consensus disorder prediction 157 177 - -
Spst2g00152 1698 CDD SANT 1373 1418 IPR001005 -
Spst2g00152 1698 SMART sant 1423 1471 IPR001005 -
Spst2g00152 1698 SMART sant 1370 1420 IPR001005 -
Spst2g00152 1698 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1366 1418 IPR017930 -
Spst2g00152 1698 Pfam Peptidase M16 inactive domain 372 590 IPR007863 -
Spst2g00152 1698 Pfam Peptidase M16 inactive domain 978 1202 IPR007863 -
Spst2g00152 1698 Gene3D - 1086 1265 - -
Spst2g00152 1698 FunFam MYB-related transcription factor 1370 1423 - -
Spst2g00152 1698 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1419 1473 IPR017930 -
Spst2g00152 1698 Pfam Insulinase (Peptidase family M16) 231 354 IPR011765 -
Spst2g00152 1698 MobiDBLite consensus disorder prediction 1594 1646 - -
Spst2g00152 1698 Gene3D - 197 423 - -
Spst2g00152 1698 MobiDBLite consensus disorder prediction 1594 1626 - -
Spst2g00152 1698 PANTHER NARDILYSIN 202 1262 - -
Spst2g00152 1698 FunFam Stromal processing peptidase chloroplastic 814 1025 - -
Spst2g00152 1698 SUPERFAMILY LuxS/MPP-like metallohydrolase 1121 1231 IPR011249 GO:0046872
Spst2g00152 1698 Pfam Myb-like DNA-binding domain 1424 1469 IPR001005 -
Spst2g00152 1698 Pfam Myb-like DNA-binding domain 1371 1418 IPR001005 -
Spst2g00152 1698 CDD SANT 1426 1469 IPR001005 -
Spst2g00152 1698 Gene3D - 1426 1473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00152 Spst-Chr2 1173631 1193983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00152 1358 1676 MYB Transcription Factor Family AT5G16770 50.289 1.59e-92 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Spst2g00152 Peptidase_M16_C 6.7e-37 CL0094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00152 K25894 - gmx:100809828 2184.45