Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00147 ATGGGGAGTGGAAGAGGTGCAACTGGGGTGATGAAAGGTTCCAATGAAGAAGATGTTATTGGAAAGAATGAGGAAGAAAAGTGGCCACCATGGATTAGGCCACTTCTCCAAACAAGTTTCTTTGTTCAATGCAAAGTTCACTCAGATTCCCACAAAAGTGAATGCAACATGTATTGTTTGGACTGTATGAATGGAGCCCTTTGCTCTGCCTGTCTTGCTTCTCACAGAGAACACAGAGCTATTCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCAGAGATACAGAAATTTGTGGACATAACAGGGGTCCAAACTTACATTATAAACAGTGCCAAGATTGTGTTCTTGAACGAAAGGCCGCAGCCTAGGCCTGGCAAAGGAGTCACCAACACCTGCCAAGTCTGTGAGCGCAGCCTTCTTGATTCATTCAGCTTCTGCTCTCTTGGTTGTAAGATAGTTGGAACCTCCAAGAAGTTCCGGAAGAAGAAAATGTTAGCTGAGACAGATGGGTCGGATGGTGAAGAATCAATAAATGGCATCAGCAATGAAACAAGAAACAAAATCCAGAGCTTCACACCATCAACACCACCACCAACAGTGGCAAATTACAGGACTGCTAAGAGGAGAAAGGGTGTCCCACATAGAGCTCCAATGGGGAGTGCCCTTATAATAGAATACTACTAA 693 0.4401 MGSGRGATGVMKGSNEEDVIGKNEEEKWPPWIRPLLQTSFFVQCKVHSDSHKSECNMYCLDCMNGALCSACLASHREHRAIQIRRSSYHDVIRVSEIQKFVDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFSFCSLGCKIVGTSKKFRKKKMLAETDGSDGEESINGISNETRNKIQSFTPSTPPPTVANYRTAKRRKGVPHRAPMGSALIIEYY 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00147 230 CDD Bbox2 44 83 - -
Spst2g00147 230 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 23 221 - -
Spst2g00147 230 Pfam PLATZ transcription factor 84 155 IPR006734 -
Spst2g00147 230 MobiDBLite consensus disorder prediction 177 201 - -
Spst2g00147 230 MobiDBLite consensus disorder prediction 170 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00147 Spst-Chr2 1137771 1139787 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Spst2g00147 PLATZ 4.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00147 - - gmx:100792668 422.935