Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00142 ATGACTCAGAACACTGATATGAGACTTGAATCGGGGACTTGCAATGTGTGCTCGGCTCCTTGTTCATCTTGCATGCATCTTAATCATGCTCTCATGGGGTCAAAGGCTGAAGAGTTTTCTGATGAGAACTGTCGCATAGGAGCAGCTATTGATCAATGTTCTATGGATGAGGATAATGCATATTCTCTTAGGAGCAGAGCTTGTGAAAGCTCACAGCACACTGTTAGTGAAGCAAGCAATATGCAGAGTGTTATTTCAAGTCATGATGCTCTGTCTGAAAAAGCCAAGAGTAGACAGATCGAACTGAATAAGTATGAAGATTCCAAGCATTTAGAAGGTCATGATGACAATACATCTTGTATTAGTAGAGCCAGTGATACTAATTTAGTGAATGGAAGTCATCAAAGGAATGAAGAGCAAACTATAATGCATGTGGAAAGGGATTCATGTTCACCTGTGTCAGAAAAATTGTCAGATTGCTCCATTGGGAATTTTAGTTCATCATTGACCAAAGAGAGGGAACATGTTGTTTCTGGTGAGAAATGTATTGCTGTTAAGGATGGCCTTATTGAAAGTACTTCCAACATTTCACTAAAAGTATGTCCAAAGATAGAATCAGATACTGATGTCTGCGGAGCTAACAATGAAGATCCTAAATGTTCAGTCCCAGATGGACAATGTGAGAAAGCTGCAGAGCTGGTTAAGTCGCCTGCCAAGCAGGAACCTCAATCTGATGACGAGAGTGATGAATCAGATGTTGTGGAGCATGATGTAAAGGTGTGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGTAGGTGCAGTGATGGTGCAGAGCACACATACTGCATGCGAGAAATGCTTGATAAAGTCCCTGAAGGGGATTGGTTATGTGAAGAATGCAAAGATGCAGAGGAGAATGAAAATAAGAAACTGGCACCCGTATCTACATACATTTATGGTGCTGACATTTGTGGAATTGAATTTTGTGGTTCAGATGTTGAAGACAAAAAAATTGTTGAAGTTAGTTCAACCTCACAAGTTTCTAGCAAAAGACTTTCAGATAACATTGAAGTAGCTCCAGCAGCAAAAAGACAAGCTCTTGAATCAAATACAGGATCACCAAAGACGTCAAGCCCCAAGAGATTAGTACCACTATCCCGGGAATCTTCATTTAAGAGCTTAAATAAATCTAAAGTGAAGCCTGGTCTTGTTATACCCAGTCGAAACAACTCTGGTGGTAGTGACACAGAGATTGTTCGCTCTCCTTCCGTTGGTCCCCGGGGACAAACTGCAAAGGGTATGTTGATGAAGTCTAATTCATTCAACAACATAAATTCCAAGCCAAGAGTCAAACTTGTAGATGAAGTTGTTCCTCAAAAACTAAAAGGGGGTCATGAACATGCTTCAAAGAACATGGAGATACCTGCTCGGATGACTGGCAAATCAACATTATTCAAATCTTCAAGTTTGGGCCGAACAAATGCAACTGAATCAAAAGTTAAAATGCTTTCACCCAAGGCCGCAACTACACAGGATTTAAAAGGATCTAGACATTTAAAAGATTCAGGTGCATTTGACAGGAAAATTCCATCTAGGATTGATCGGTCTGTGGTTAGTTCTGTTGTTTCTACTCCTAAGGGTGATCAAAGGCTTACACCTCGTGCTGAATCCAGTAAACCTTCATCATTGAACAACAATAGAGAGTTGAAGGCTAATCAGGACGGAAAATCAAGTGCATTATCAAGGTCAATGAGTAATATAAACCGGAAAAGTTTGGAGCCTCAAGTTATTTCAGGTGTAATCTCTATTCCTGCTATTGTGTTTTCTTTGGGGACAGGGGTTAAGAGAACATCAACCCGTGTTGATGAAGCTCAACAGGATGTGATTCCTCGAACACGGGAGACAGCTAATCAGATTGAGAAAAGCAGAGATAGTTCTAGTGATCGGGGAAGGCCTGCTGTTCCTACTTCAAAAAACCCATTTGGCCATGCTATGGAATGTTGCACCGCTGGCACTACTCAGGAATCTGGTGCTGAAATATCTGTAACTACCTCAAGTAGTTCAAAAGAGGAGGCACATAAAGACAATATATTGAAAGCTGCTATCCAGGCTGCATTGCTTAGAAGGCCTGAAATTTACAAAAAGAAAGAAGTGTCTAACCAAACTGACGAGGTTTCTACTTCAGCCACGGAGTTGAATTGTGAAGTAACTTCAAAAGACCAAGTCTTGGTTACCAGCACACTGAAGAATAGTATTTCTGTTGAAGAAACCCATGAACAACAGGAAATCCTTGAGAATTCTACATCAGATTCTTCCAAATGTTCATCTGCCAACGATTTGAAGCAAATCAAGTCTTGTCCAACTGACTTTCCATCCCAACCAGGAAAGTCTGGTTCCATTTGTGTTGAAGCTGGAAAACTAGTGAGAGACATGTCTGATAAAGCCGTGACATTGTCAATTGTTCCTTCCAAGATGTTGGCCTTTCCTGAATACGAATACATCTGGCAGTATGGAACATCTTATGATGAAACTAGCTTGTCTCTAGTGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCTGATTTATACACCGGACTTCAGGCGCATTTATCCTCTTGTGCTTCTCCTAAGGTTCTTGGAGCAGTGAAGAAGTTTCTACCAAAAGTTCCCCTTAATGAAGCTTCTCGTTTGAGCATGTGGCCTTCACAATTTCATCATGGTGGTCTTAGTGAACATAATATAGCTCTTTACTTCTTTGCCAGGGATGTTGAAAGGCATGCTTTTGGTGGAGAGTTCGTCCTTGACAATTGGGCATACTTGGCTTGCAGTTTTGATGACTGA 2862 0.4109 MTQNTDMRLESGTCNVCSAPCSSCMHLNHALMGSKAEEFSDENCRIGAAIDQCSMDEDNAYSLRSRACESSQHTVSEASNMQSVISSHDALSEKAKSRQIELNKYEDSKHLEGHDDNTSCISRASDTNLVNGSHQRNEEQTIMHVERDSCSPVSEKLSDCSIGNFSSSLTKEREHVVSGEKCIAVKDGLIESTSNISLKVCPKIESDTDVCGANNEDPKCSVPDGQCEKAAELVKSPAKQEPQSDDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLDKVPEGDWLCEECKDAEENENKKLAPVSTYIYGADICGIEFCGSDVEDKKIVEVSSTSQVSSKRLSDNIEVAPAAKRQALESNTGSPKTSSPKRLVPLSRESSFKSLNKSKVKPGLVIPSRNNSGGSDTEIVRSPSVGPRGQTAKGMLMKSNSFNNINSKPRVKLVDEVVPQKLKGGHEHASKNMEIPARMTGKSTLFKSSSLGRTNATESKVKMLSPKAATTQDLKGSRHLKDSGAFDRKIPSRIDRSVVSSVVSTPKGDQRLTPRAESSKPSSLNNNRELKANQDGKSSALSRSMSNINRKSLEPQVISGVISIPAIVFSLGTGVKRTSTRVDEAQQDVIPRTRETANQIEKSRDSSSDRGRPAVPTSKNPFGHAMECCTAGTTQESGAEISVTTSSSSKEEAHKDNILKAAIQAALLRRPEIYKKKEVSNQTDEVSTSATELNCEVTSKDQVLVTSTLKNSISVEETHEQQEILENSTSDSSKCSSANDLKQIKSCPTDFPSQPGKSGSICVEAGKLVRDMSDKAVTLSIVPSKMLAFPEYEYIWQYGTSYDETSLSLVGVFEVHRNGKPPDLYTGLQAHLSSCASPKVLGAVKKFLPKVPLNEASRLSMWPSQFHHGGLSEHNIALYFFARDVERHAFGGEFVLDNWAYLACSFDD 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00142 953 MobiDBLite consensus disorder prediction 761 782 - -
Spst2g00142 953 MobiDBLite consensus disorder prediction 495 587 - -
Spst2g00142 953 MobiDBLite consensus disorder prediction 367 395 - -
Spst2g00142 953 MobiDBLite consensus disorder prediction 678 697 - -
Spst2g00142 953 MobiDBLite consensus disorder prediction 542 587 - -
Spst2g00142 953 SUPERFAMILY FYVE/PHD zinc finger 247 309 IPR011011 -
Spst2g00142 953 MobiDBLite consensus disorder prediction 626 654 - -
Spst2g00142 953 MobiDBLite consensus disorder prediction 108 137 - -
Spst2g00142 953 MobiDBLite consensus disorder prediction 495 517 - -
Spst2g00142 953 MobiDBLite consensus disorder prediction 232 253 - -
Spst2g00142 953 ProSiteProfiles Zinc finger PHD-type profile. 258 309 IPR019787 -
Spst2g00142 953 SMART PHD_3 260 307 IPR001965 -
Spst2g00142 953 MobiDBLite consensus disorder prediction 372 395 - -
Spst2g00142 953 MobiDBLite consensus disorder prediction 624 669 - -
Spst2g00142 953 MobiDBLite consensus disorder prediction 519 539 - -
Spst2g00142 953 MobiDBLite consensus disorder prediction 120 137 - -
Spst2g00142 953 MobiDBLite consensus disorder prediction 407 434 - -
Spst2g00142 953 MobiDBLite consensus disorder prediction 678 693 - -
Spst2g00142 953 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 243 325 IPR013083 -
Spst2g00142 953 PANTHER - 258 933 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00142 Spst-Chr2 1118742 1123547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00142 257 306 C2H2 Transcription Factor Family AT3G01460 38.000 7.87e-06 48.1