Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00118 ATGGACACGCCAGATAGGAACCAGATCAGTGCTACCCTCTCTAAGTTTGAGGATTCACCTGTTTTCAACTATATCAACAGTTTGTCTCCTATAAAGCCAGTTAAGTCTGTTCCCATTAGTCAGACTTTCAATTCACTGAGCTTTTCGTCTCCTCCATCTGTTTTCACGTCACCCCATGTCAGCTGTCTCAAGGAATCTAGATTCCTCAGAAGACACATCCCGGTGGCCACATCAAAGCCTAAGGTTTCTTCTGAAGATGTAAATAAAGTTCACACGAGTGAAGAGACTCTTGCTGATTCCACACGTGCACATCATAACCCAAGTAAATTGCAGGAAAACACTGGTAAAGGGATTTCTGTAGGAGATGCTTCTGTCGAGTTATCTAGCGAGCACATCAAATTCTCAGTTGAGCAACCACAAGCTTTAAACTACAATAATTGTGGGAGCCCTGGCTATGATCCCCCACTCTGTGGTGACGAGGATAACACTCTTTTGGAACTGCCCGGTGAGGCAGCACCGGGTGCTGGCTACGTTCAGGAAAAGTGTAAAACTGATTCAGTCGAGGGTGAAGTGCATCTTCAGGAAATATGTCAAATGGAGCCAAAGAGTGAAGGTTCAGACTGCTATTGGGATAGTTTAATTCCTGATGGCCTTGATATGCTCATTTTTAATTCCCCAGGTGAAGCAGAAGCTTTAAAGGGTTTAATGCACAAACCATCGGACTCTTCTAAACGACTGAGCGATTTTATGTCTTTACTACCACTTTCTACCATCCATAATGGTAGAAAGATGCACATTGTTGATTCGGTTGCTTCAGGTTCTGAGCACGAAATTGGAGATCACTGTTCTGAGCCAACGATAACAGCCACGAACACGGACCAAACACAGGATAATCTCGCCAATGTTGCTTTGGTGACTAGCAATTCAAATGAGAACGCAAATGATCAGCTTGTTTCTGTCACGCACCGTGCCATACGGAGGCGATGTCTAGACTTTGAGATGGTCAATGTGCAAAGGAAGAACACTGATGATAATTCAAACCCCGGTTCAAGTGCATCCGAGTCTGATGAGAGGAATGTAGCCAATGATAAGCAACTGCTTCCCGCAAAACGAAATGGGAATTTTCAGAGGGGAATTTTGCCAGGAATTGGTCTACACTTGAATGCACTTGCTGCCTTAAAAGAATACAAGGGCATACAAATTGAAAGTTTGTCTTCTGGAAGACAACTCAGTCTGCCCAGCTCTACATCTTTGCAAATCTCTACATCTTTGCAAATCTCTACATTCCAAGAACACCAGCATCTAGCGTTGGTACCTGTATCATCTGAAAGAGAATTGGATCCATCGGACAATGGGCTTCTGCCTGCCGAAGATTGTTCCCAGCCATCAGTTTACATGACTGGTGAAGACTTCAATATGAATAGCCCCAGAAAGAAAAAGCAAGTGCAGCGTAAGGTGGAGACACCTGGGGAAACTGAGGGCTGTAAACGCTGCAATTGCAAGAAGTCAAAGTGTTTGAAGCTCTATTGCGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAGCCCTGCTCCTGTCAGGATTGCTTCAACAAACCTGTTCATGAAGACACTGTTCTTCAAACTCGCAAGCAGATTGAATCTCGTAACCCTCTTGCATTTGCTCCTAAAGTCATCAGAAATTCTGATTCTGTACCTGAGATTGGGGATGACCCAAATAAAACTCCAGCTTCAGCACGACACAAAAGAGGATGCAACTGCAAAAAGTCAAGCTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGCGTTGGTTGCTCTATCAGCTGTAGATGTGAAGGGTGCAAGAATGCTTTCGGTAGAAAAGATGGTTCTGCTCCTGTAGGGATAGAAACTGAGCCAGAAGAAACAGAAGCATCTGGCAAGGGTGTGGCACAAAAAGCTTTACAGAAAACTGAAATTCAGAGCACTGAAGATCATCCGGATTCTGCTACAGTGTCGACCCCATTACGACTTTCCAGGCCATTGCTTCCGTTGCCCTTTTCGTCAAAGGGAAAGCCACCAAGATCTTTTGTTACCACCATCTCAGGCTCTGCATTATTTGCCACCAGCCAAAAGCTTGGGAAACCAAACTCTCTTTGGTCTCAATCTAAGCATTTTCAAACTGTCCCAGATGACGAAATGTCAGATATTCTCCTCGGTGATACCTCTCCTATCACATGCATCAAAACTTCTTCTCCAAATGGCAAGAGGATCTCCTCTCCTAACTGTGACTTGGGATCATCTCCTAGTCGCAGAGGAGGCAGGAAGTTGATATTACAATCCATTCCCTCATTTCCTTCTCTCACCCCTCACCCTTAG 2358 0.4457 MDTPDRNQISATLSKFEDSPVFNYINSLSPIKPVKSVPISQTFNSLSFSSPPSVFTSPHVSCLKESRFLRRHIPVATSKPKVSSEDVNKVHTSEETLADSTRAHHNPSKLQENTGKGISVGDASVELSSEHIKFSVEQPQALNYNNCGSPGYDPPLCGDEDNTLLELPGEAAPGAGYVQEKCKTDSVEGEVHLQEICQMEPKSEGSDCYWDSLIPDGLDMLIFNSPGEAEALKGLMHKPSDSSKRLSDFMSLLPLSTIHNGRKMHIVDSVASGSEHEIGDHCSEPTITATNTDQTQDNLANVALVTSNSNENANDQLVSVTHRAIRRRCLDFEMVNVQRKNTDDNSNPGSSASESDERNVANDKQLLPAKRNGNFQRGILPGIGLHLNALAALKEYKGIQIESLSSGRQLSLPSSTSLQISTSLQISTFQEHQHLALVPVSSERELDPSDNGLLPAEDCSQPSVYMTGEDFNMNSPRKKKQVQRKVETPGETEGCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPVHEDTVLQTRKQIESRNPLAFAPKVIRNSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSAPVGIETEPEETEASGKGVAQKALQKTEIQSTEDHPDSATVSTPLRLSRPLLPLPFSSKGKPPRSFVTTISGSALFATSQKLGKPNSLWSQSKHFQTVPDDEMSDILLGDTSPITCIKTSSPNGKRISSPNCDLGSSPSRRGGRKLILQSIPSFPSLTPHP 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00118 785 MobiDBLite consensus disorder prediction 338 360 - -
Spst2g00118 785 MobiDBLite consensus disorder prediction 625 670 - -
Spst2g00118 785 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 784 IPR044522 GO:0003700
Spst2g00118 785 MobiDBLite consensus disorder prediction 78 117 - -
Spst2g00118 785 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 582 617 IPR005172 -
Spst2g00118 785 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 496 531 IPR005172 -
Spst2g00118 785 MobiDBLite consensus disorder prediction 743 785 - -
Spst2g00118 785 MobiDBLite consensus disorder prediction 84 106 - -
Spst2g00118 785 MobiDBLite consensus disorder prediction 743 760 - -
Spst2g00118 785 MobiDBLite consensus disorder prediction 339 356 - -
Spst2g00118 785 ProSiteProfiles CRC domain profile. 494 619 IPR005172 -
Spst2g00118 785 SMART CXC_2 493 534 IPR033467 -
Spst2g00118 785 SMART CXC_2 579 620 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00118 Spst-Chr2 1002184 1006597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00118 16 784 CPP Transcription Factor Family AT4G14770 43.202 1.43e-156 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Spst2g00118 TCR 1.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00118 - - gmx:100804447 1342.79