Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00116 ATGGAGAAAGCAGAAGGAAAAGAAGAAAGTGTCGATTTGAGCCAAATATCTCTTCGACCCCTTGAGCTCTCTGACCTGGATGATCTCATGGTGTGGACCACTGATGAAAAGGTGGCCACTTTTTGCACTTGGGATACTTACACGAGCAAAGACGATGGGATCAACTTCATCCAAAACATAGCCACCAAATTTCTGTGGTGCAGAGCAATATGCCTGAACAATCGTGCTATTGGGTGTGTTTCTCTGTCCTCAAATCCAGAGCACGATAAAAGCAGGAGCAGATCCGTGGAACTTGGGTATGTCTTGGGTTCCAAACACTGGGGCAAAGGGATTGTGACAGTGGTCGTGAAACAAGTGGTTAAGGCTGCGTTCACTGAGTTGCCATTGCCACAGTTGGAGAGGGTTGAAGCTCTTGTTGATGTGCTCAATGTTGGGTCTCAGAGAGTGCTGGAAAAAGCTGGTTTCCAAAGAGAGGGAATTCTCAGAAAGTTTGTGTTCGTCAAAGGAAAAAGCAGAGATACGGTCATGTTCAGTGTTCTCTCCACAGATCCTCACCTTTCATTTCCTTGA 570 0.4614 MEKAEGKEESVDLSQISLRPLELSDLDDLMVWTTDEKVATFCTWDTYTSKDDGINFIQNIATKFLWCRAICLNNRAIGCVSLSSNPEHDKSRSRSVELGYVLGSKHWGKGIVTVVVKQVVKAAFTELPLPQLERVEALVDVLNVGSQRVLEKAGFQREGILRKFVFVKGKSRDTVMFSVLSTDPHLSFP 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00116 189 Gene3D - 9 186 - -
Spst2g00116 189 Pfam Acetyltransferase (GNAT) domain 17 156 IPR000182 GO:0016747
Spst2g00116 189 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 180 IPR016181 -
Spst2g00116 189 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 16 173 IPR000182 GO:0016747
Spst2g00116 189 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00116 Spst-Chr2 989304 989873 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Spst2g00116 Acetyltransf_3 7.4e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00116 - - pvu:PHAVU_002G044100g 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00116 2 989304 989873 Spst2g00116 2 989304 989873 ECH