Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00088 ATGTCTTTAGCTATCTTTCTCTCTTCCATTCTTGCACTTCTTTCACTTTCACATCTGAATGGCTTACATGCCATACAATCAAATACAAGCATCGCTGCTGGAACAAACTCTACGTGGAAGTCACCCTCCGGTGATTTTGAATTTGGATTTCACGCTCTTCGCAATCGTCTCTTTCTTGTAGGAATATGGTTTGGGAGAATCCAAGAGAGAACACTCGTATGGTACATCACTCCTCCTGTGGGACAAAATTCCCAAATCCAATTCACTTCTGCAGGACAACTTTTGGTAGTATACCCAAACGGAACTACTGCTCGGACAATATATGATGGAGGAAACGGAGGTGCTGCAACATCTGCCAACATGCAAGATGATGGTAATTTTGTCTTGAATAACACCAACTTAGGACCTGTGTGGCAGAGTTTCAACAATTTAACGGACACAATCTTACCAGGCCAAACCTTGCAGACTAATCAAACCCTCCATTCCAAGGGGAAAGGACCTTCAAACTACTCAATGGGAAGTTTCATGTTACAAATGCAACAAGATGGCAACTTGGTGCTCAAAGCGTACCAGTGGTCAGACCCTGCATACTGGTTCACTTCAACCGCCGAAACCTCCAATGTGACTTTGGTGTATAATGCTACCACTGCTCTCATGTACCTTGTCAGCGGCACCAGGAACATCTACTCCTTAACCAACACCACTCCAACACCGGTGGAGGATTACTATCATCGTGCTACAATAGATGAGAATGGGAATTTCCAACAATACGCATATAACAAAAGGAATGGGAGCGGGTGGAGTAGGGTTTGGAGAGCTGTGGAGGACCCCTGCAGAGTGAATGTTGTCTGTGGTGTGTATGGTCTGTGCACTTCTCCTGACAATGAATCAGTGAAGTGTGAGTGTATTCCAGGTTATATCCCATTGGATCATCAGGATGTTTCCCAAGGGTGTCACCCACCTGCTGACATCAATTATTGTGCAGAGACCAACTTCGAGCTCCAGGTCTTTGACGACACTGATTTCCAATTCAATACTGATTTTTTTCGTTTAGCTAGTGTCGACTTGGAAAGTTGTAAGAAGGCTGTAATAGATGATTGTAATATCGTTGCTGCAACATATAGCCCTTCCACCTCCACATGTGTCAAGAAGAGACTGCCCTTGCTGAATGCTAGAAATAGCTCTTCTTCAAAGGGAATGAAAGCACTACTTAAAGTGTCTGGGACATCTAAAGTTCCCAAGAAGAAAATTTTTAACGTAAAAGTCTTTCTGAAGGTTCTTCTTGCAGTTACTGCCACTCTTGCCTGTTTCTTTGGTGCCCTTGTTGTATACTATCATCCTTTCGCTCGGAGACTAACAAGAAGAAAGAAGCACCTGAACGCAACCGCTATTGGAATCAACTTCAGAGAATTCACCTTTCAGGAGCTGCATGAAGCAACAGACGGATTCACTAGGATTCTCGGAAAGGGAGCTTCAGGCAAGGTCTATCGTGGTGCGCTTATAATAGATGGTGCAGAGATTGGTATTAAAGTCAAGAAACTAGAAAAGAAAATTGAGAAAAGTGAAAGAGAATTCATGACTGAGCTAAAAATTATTGGCCGTACCCATCACAGAAATTTGGTGAGGCTTTTGGGCTTTTGCATTGAGAGTAGTCATAGAATTCTTGTGTATGAGATGATGTCAAATGGTGCCCTGTCTGGTTTTTTGTTTGGCGAGGGAGATAGGCCTCATTGGGGTCAGAGGATTGAAATGGCTCTTGGAGTCGCAAGAGGCCTGCTATACTTGCACGAAGAGTGCAACACCCAAATCATACATTGTGACATCAAGCCAGAAAATGTGTTACTTGATGCCGAATACACAGCAAAAATTGCAGATTTTGGGCTTTCCAAGCTTTTGAAAAAAGATCAGACAAGAACTAGCACTAATTTAAGAGGGACAATGGGATACATGGCACCTGAATGGCTAAGAAGTGCTCCAGTAACTGCCAAAGTTGACATATACAGCTTTGGAGTTATGTTATTGGAGATTATTTGCTGCAGAAGACACGTTGTGGTTTGTCAGGACGGAAAAGACAGTGAAGATGATGATTTGGTTCTTTCAAATTGGGTTTTAAGGTGTGCGGTGTCTAGGAAACTAGAGCTAGTGGTGAGACATGACTTAGAAGTGCTGAATGATTTCAAGAAGTTTGAGGAAATGGCCTTGGTTGGAATATGGTGTGTTCATCCAAATCCTTCTCTTAGGCCTTCAATGAAGCACGTGATGCAAATGCTGGATGGAACCGTGGAAGTTGGTGTTCCTCCTTTGGTTTATGATCATATGATGGCAGATCAAGGCCTATAG 2340 0.4308 MSLAIFLSSILALLSLSHLNGLHAIQSNTSIAAGTNSTWKSPSGDFEFGFHALRNRLFLVGIWFGRIQERTLVWYITPPVGQNSQIQFTSAGQLLVVYPNGTTARTIYDGGNGGAATSANMQDDGNFVLNNTNLGPVWQSFNNLTDTILPGQTLQTNQTLHSKGKGPSNYSMGSFMLQMQQDGNLVLKAYQWSDPAYWFTSTAETSNVTLVYNATTALMYLVSGTRNIYSLTNTTPTPVEDYYHRATIDENGNFQQYAYNKRNGSGWSRVWRAVEDPCRVNVVCGVYGLCTSPDNESVKCECIPGYIPLDHQDVSQGCHPPADINYCAETNFELQVFDDTDFQFNTDFFRLASVDLESCKKAVIDDCNIVAATYSPSTSTCVKKRLPLLNARNSSSSKGMKALLKVSGTSKVPKKKIFNVKVFLKVLLAVTATLACFFGALVVYYHPFARRLTRRKKHLNATAIGINFREFTFQELHEATDGFTRILGKGASGKVYRGALIIDGAEIGIKVKKLEKKIEKSEREFMTELKIIGRTHHRNLVRLLGFCIESSHRILVYEMMSNGALSGFLFGEGDRPHWGQRIEMALGVARGLLYLHEECNTQIIHCDIKPENVLLDAEYTAKIADFGLSKLLKKDQTRTSTNLRGTMGYMAPEWLRSAPVTAKVDIYSFGVMLLEIICCRRHVVVCQDGKDSEDDDLVLSNWVLRCAVSRKLELVVRHDLEVLNDFKKFEEMALVGIWCVHPNPSLRPSMKHVMQMLDGTVEVGVPPLVYDHMMADQGL 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00088 779 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 560 765 - -
Spst2g00088 779 ProSiteProfiles Bulb-type lectin domain profile. 22 142 IPR001480 -
Spst2g00088 779 Gene3D Transferase(Phosphotransferase) domain 1 560 763 - -
Spst2g00088 779 Pfam Protein kinase domain 485 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00088 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
Spst2g00088 779 CDD STKc_IRAK 487 759 - -
Spst2g00088 779 PIRSF SRK 1 777 IPR024171 GO:0004674
Spst2g00088 779 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 202 IPR036426 -
Spst2g00088 779 SUPERFAMILY Protein kinase-like (PK-like) 460 757 IPR011009 -
Spst2g00088 779 SUPERFAMILY alpha-D-mannose-specific plant lectins 169 262 IPR036426 -
Spst2g00088 779 Pfam S-locus glycoprotein domain 239 308 IPR000858 GO:0048544
Spst2g00088 779 Gene3D - 144 282 - -
Spst2g00088 779 FunFam S-receptor-like serine/threonine-protein kinase 450 559 - -
Spst2g00088 779 Gene3D Phosphorylase Kinase; domain 1 454 559 - -
Spst2g00088 779 ProSiteProfiles Protein kinase domain profile. 481 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00088 779 SMART blect_4 30 144 IPR001480 -
Spst2g00088 779 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 31 767 - -
Spst2g00088 779 Gene3D - 22 143 IPR036426 -
Spst2g00088 779 Coils Coil 504 531 - -
Spst2g00088 779 Pfam D-mannose binding lectin 79 161 IPR001480 -
Spst2g00088 779 SMART serkin_6 481 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00088 Spst-Chr2 746570 748909 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00088 467 762 Receptor kinase-like Gene Family AT5G45780 39.203 2.56e-64 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst2g00088 Pkinase 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00088 - - gmx:102662509 1195.65