Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00086 ATGGCTACGGAGTTTCTTGTTCTCTCTGTTGCCATACTTCTGTTTTTCAATGTTCGTAGGAGCGCCAGCTCAATTGAACTGGGATCCAGCATTGTGGCTGGAAGTGGTACCAATTCATCTTGGCGATCATCCACCGGTGATTATGCTTTTGGATTCTACCGTCTTGCTAGTGGTCACTATCTTGCTGGAATTTGGTTTGACAAAATTCCAAATAAAACATTGGTTTGGTCTGCAAACCGTGACAATCCAGTTGAAAGTGGATCATCCATCAATCTCACACGAAGTGGCCAGTTTGTGATCCAACGTCTCAATGGGGTTTCATCCCCCATCTACAAAGGAGCAGACGCAGCTTCTGCGACGATGCAGGATGATGGGAATTTCGTCTTGAGGAATTCACTTTCCAATGTTATATGGCAGAGCTATGATTCACCCACTGATACTCTTCTATTAGGCCAAACTTTGAATACGAGTCAGACTCTCTACTCCAATGCCAATGGATCAGTAGACTACTCAACGGGACAATACAGTTTGGAGATCCAACAAGATGGCAACATCGTTCTTAAAGCTTATCGGTACACGGATTCTGCCTACTGGTGGAGTGGTACCGCCCAAAACACAGGTGTGAGAATTATTTTTGAGAACACAACAGGTTTTCTTTACGCGGTCAATTCCACCCAACAAACTATATCTAACATCACGACTGAAGTAGTGGGTGCAGTCGAAGATTACTATCAACGTGTGGTGGTGGATGACAAGGGAAACTTTCAGAAGTTGATTTACCAAAAAGCAAATGGAAATGGGTGGAGATCTGTGTGGCAGGCCGTGACAAAACCCTGCACCGTGACTGCACTTTGTGGGGTATATGGTTTTTGCAATACATCTGGTTCTGACACCCTAACATACACTTGTGAATGCTTGCCTGGCTATACTCCTTTGGATCCAACTGTACCCTCCAAGGGGTGCTATCTCGCTGAGGTCAAGGACTTGTGTCCTGCAAATTCTTCTGCCTCAAACTTTAAGGTGGAAGTGAAACAGATTCAAGATGCTGATGTACCAAACGCTGGATACTTTTTTCTTGATCTAGAAGTCTTAGATGGGATGAATTTGGAAAGCTGCACGAGGGAACTGATGGATGATTGTCTCTGCATGGCTGCTGTTTTAAATGGCACTGCTTGCCATAAGAAAAAGTGGCCAATTATAAATGCCATAAGAATCATCCCTGACACTAGTAATCTTGTGATGCTGATCAAAGTTCCTCCGGTTGACAACATGGATAATAAAAACGATTCATCGTCTTTGCTTGTTTTGATAGTTGCTCTCGTCTCTTGCTCTCTACTTGCTGTACTGTTTGCAGCCACTGCGATTTACCATCACCCCGTTTGCCAGCATCTCATGCACAAACAAGCACCACCAAAGCCAAAGCCTATGGATATCAATCTAAAGGTATTTTCATTCCAACAGCTGAGAGAAGCAACTAATGGATTCAAGGATAGACTTGGTCGAGGTGCCTATGGCACGGTGTATAGTGGGGTTTTAAACATAGATGATCAACCAGTTGAGGTTGCTGTCAAACAACTGGAGCAAGTAGAAGACCAAGTTGAGAAAGAATTTGTGACAGAAGTTCAAATTATTGCTCTCACTTATCATAGAAATCTAGTTGGTTTATTGGGCTTTTGCAATGAGCATAACCATAGACTTTTGGTTTATGAGAAAATGGAAAATGGGACACTATCCAACTTCCTTTTTGGAGGAGCTAAACCCAGCTGGGACAACAGAGTTAGGATTGTGCTTGAAATTGCAAGAGGCTTATTGTATCTACATGAGGAGTGTGACCAACAAATCATCCATTGTGACATAAAGCCTCAGAATGTTCTGCTTGACTCTAGTTTCACTGCAAAGATTTCAGATTTTGGGCTGGCAAAGCTGATAATGAAAGATAAAACTCGAACAAACACAAATGCTAGAGGTACAGTGGGATATATGGCACCAGAATGGCTAAAAAATGCTCCTGTTACTACAAAGGTGGATATCTACAGCTTTGGCGTCATGTTGCTGGAAATCATATTTTGCAGAAGGCACATTGAGTTGCATCAAATTGAGGATGAAACAAGGGGTGATGACATGATACTCGTAGACTGGGCTCTACATCTGGCAATAGAAAACAATTTAAGATCCGCAGTGATTGATGATGTTGAAGTTGAAGCTGATTTCAACAGGTTCGAAAGAATGGCAATGGTAGGTTTATGGTGCATAAATGCCAATCCAACTCTTCGACCATCTATGAAAATGGTGGTACAAATGTTGGAAGGAAACATAGAAGTGGCTGTTCCACCATTCAACTGA 2343 0.4251 MATEFLVLSVAILLFFNVRRSASSIELGSSIVAGSGTNSSWRSSTGDYAFGFYRLASGHYLAGIWFDKIPNKTLVWSANRDNPVESGSSINLTRSGQFVIQRLNGVSSPIYKGADAASATMQDDGNFVLRNSLSNVIWQSYDSPTDTLLLGQTLNTSQTLYSNANGSVDYSTGQYSLEIQQDGNIVLKAYRYTDSAYWWSGTAQNTGVRIIFENTTGFLYAVNSTQQTISNITTEVVGAVEDYYQRVVVDDKGNFQKLIYQKANGNGWRSVWQAVTKPCTVTALCGVYGFCNTSGSDTLTYTCECLPGYTPLDPTVPSKGCYLAEVKDLCPANSSASNFKVEVKQIQDADVPNAGYFFLDLEVLDGMNLESCTRELMDDCLCMAAVLNGTACHKKKWPIINAIRIIPDTSNLVMLIKVPPVDNMDNKNDSSSLLVLIVALVSCSLLAVLFAATAIYHHPVCQHLMHKQAPPKPKPMDINLKVFSFQQLREATNGFKDRLGRGAYGTVYSGVLNIDDQPVEVAVKQLEQVEDQVEKEFVTEVQIIALTYHRNLVGLLGFCNEHNHRLLVYEKMENGTLSNFLFGGAKPSWDNRVRIVLEIARGLLYLHEECDQQIIHCDIKPQNVLLDSSFTAKISDFGLAKLIMKDKTRTNTNARGTVGYMAPEWLKNAPVTTKVDIYSFGVMLLEIIFCRRHIELHQIEDETRGDDMILVDWALHLAIENNLRSAVIDDVEVEADFNRFERMAMVGLWCINANPTLRPSMKMVVQMLEGNIEVAVPPFN 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00086 780 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 778 - -
Spst2g00086 780 Pfam S-locus glycoprotein domain 220 311 IPR000858 GO:0048544
Spst2g00086 780 Gene3D Transferase(Phosphotransferase) domain 1 572 775 - -
Spst2g00086 780 Pfam Protein kinase domain 496 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00086 780 Gene3D Phosphorylase Kinase; domain 1 467 570 - -
Spst2g00086 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 776 - -
Spst2g00086 780 CDD B_lectin 43 144 IPR001480 -
Spst2g00086 780 SUPERFAMILY alpha-D-mannose-specific plant lectins 150 225 IPR036426 -
Spst2g00086 780 ProSitePatterns Protein kinases ATP-binding region signature. 499 524 IPR017441 GO:0005524
Spst2g00086 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 19 142 - -
Spst2g00086 780 SMART serkin_6 493 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00086 780 CDD EGF 278 310 - -
Spst2g00086 780 FunFam S-receptor-like serine/threonine-protein kinase 463 571 - -
Spst2g00086 780 ProSiteProfiles Bulb-type lectin domain profile. 28 142 IPR001480 -
Spst2g00086 780 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 202 IPR036426 -
Spst2g00086 780 CDD STKc_IRAK 499 770 - -
Spst2g00086 780 Pfam D-mannose binding lectin 73 158 IPR001480 -
Spst2g00086 780 Gene3D - 144 284 - -
Spst2g00086 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Spst2g00086 780 SMART blect_4 22 144 IPR001480 -
Spst2g00086 780 ProSiteProfiles EGF-like domain profile. 275 315 IPR000742 -
Spst2g00086 780 PIRSF SRK 1 780 IPR024171 GO:0004674
Spst2g00086 780 SUPERFAMILY Protein kinase-like (PK-like) 473 769 IPR011009 -
Spst2g00086 780 Gene3D - 18 143 IPR036426 -
Spst2g00086 780 ProSiteProfiles Protein kinase domain profile. 493 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00086 Spst-Chr2 738120 740462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00086 389 774 Receptor kinase-like Gene Family AT1G56120 37.437 4.27e-65 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst2g00086 Pkinase 3.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00086 - - pvu:PHAVU_002G046100g 1296.18