Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00085 ATGTCTTTAGCTATATTTCTCCCGTCCATTCTTGCACTTCTTTCACTTTCACATCTGAATGGCTTACATGCCATACAATTAAATACAAGCATCACTGCTGGTACAAACTCTACGTGGAAGTCACCCTCCGGTGATTTTGAATTTGGATTCTACCTTCTTCCCAATGGTCTCTTTCTTGTGGGAATATGGTTTGGGAGAATCCAAGAGAGAACACTCGTATGGTACAACACTCCTCCTGTGGAACAAAATTCCCAAATCCAATTCACTTCTGCAGGGCAACTTTTGGTAGTATACCCAAACGGAACTACTGCTCAGACCATATATGATGGAGGAAACGGAGGTGCTGCAACATCTGCCAACATGCATGATGATGGTAATTTTGTCTTGAATAACACCAACTTAGGACCTGTGTGGCAGAGTTTCAACAATTTAACGGACACAATCTTACCAGGCCAAACCTTGCAGACTAATCAAACCCTCCATTCCAAGGGGAAAGGACCTTCAAACTACTCAATGGGAAGTTTCATGTTACAAATGCAACAAGATGGCAACTTGGTGCTCAAAGCGTACCAGTGGTCAGACCCTGCATACTGGTTCACTTCAACCTTGACCTCCAATGTGACTTTGGTGTATAATGCTACCACTGCCCTCATGTACCTTGTCAGCGGCACCAAAAACATCTACTCCTTAACCAACACCACTCCAACACCGGTGGAGGATTACTATCATCGTGCTACAATAGATGAGAATGGGAATTTCCAACAATATGCATATAACAAAAGGAATGGGAGCGGGTGGAGTAGGGTTTGGAGAGCTGTGGAGGACCCCTGCAGAGTGAATGTTGTCTGTGGTGTGTATGGTCTGTGCACTTCTCCTGACAATGAATCAGTGAAGTGTGAGTGTATTCCAGGTTACATCCCATTGGATCATCAGGATGTTTCCCAAGGGTGTCACCCACCTGCTGACATCAATTATTGTGCAGAGACCAACTTCGAGCTCCAGGTCTTTGACGACACTGATTTCCAATTCAATACTGATTTTTTTCGTTTAGCTAGTGTCGACTTGGAAAGTTGTAAGAAGGCTGTAATAGATGATTGTAATATCGTTGCTGCAACATATAGCCCTTCCACCTCCACATGTGTCAAGAAGAGACTGCCCTTGCTGAATGCTAGAAATAGCTCTTCTTCAAAGGGAATGAAAGCACTACTTAAAGTGTCTGGAACATCTAAAGTTCCCAAGAAGAAAAATTTTAACGTAAAAGTCTTTCTGAAGGTTCTTCTTGCAGTTACTGCCACTCTTGCCTGTTTCTTTGGTGCCCTTGTTGTATACTATCATCCTTTCGCTCGGAGACTAACAAGAAGAAAGAAGCACCTGAACGCAACCGCTATTGGAATCAACTTCAGAGAATTCACCTTTCAGGAGCTGCATGAAGCAACAGACGGATTCACTAGGATTCTCGGAAAGGGAGCTTCAGGCAAGGTGTATCGTGGTGCGCTTATAATAGATGGTGCAGAGATTGGTATTGCAGTCAAGAAACTGGAAAAGAAAATTGAGAAAAGTGAAAGAGAATTCATGACTGAGCTCAAAATCATTGGCCGTACCCATCACAGAAATTTGGTGAGGCTTTTGGGCTTTTGCATTGAAAGTAGCCATCGAATTATTGTGTATGAGTTGATGCCAAGTGGAGCACTGCCCCGATTTCTGTTTGGAGAGAGAGAAAGGCCTCAATGGGGTCAGAGGATTGAAATGGCTCTTGGAGTCGCAAGAGGCTTGCTATACTTGCACGAAGAGTGTAACACCCAAATCATACATTGTGACATCAAGCCAGAAAATGTGTTACTTGATGTCAATTACACAGCAAAGATTGCAGATTTTGGGCTGTCCAAGCTTTTGAACAAAGATCAGACAAGAACAAACACTAATTTAAGAGGGACAATTGGATACATGGCACCTGAATGGCTAAGAAGTGCTCCAATAACTGCTAAAGTTGACATATACAGTTTTGGGGTTATGCTATTGGAGATTATTTGCTGCAGGAGGCACGTTGAGTCCAGTCAGGATGGAAAAAACAGTGAAGATGATGATTTGGTTCTTTCAAATTGGATTTTAAGGTGTGTGGTGAATAGGCAACTAGAGCTAGTGATGAAACATGACTCAGAAGTGCAGAATGATTTCAAGAAGTTTGAGGAAATGGCCTTGGTTGGACTATGGTGTGTTCATCCAAATCCTTCTCTTAGGCCTTCAATGAAGCACGTGATGCAAATGCTAGATGGAACCGTAGAAGTTGTAGTTCCTCCTTTGGTTTATGATCTGATAATGGCAGATCAGGGTGCTGAGAATCCCACCCAGAGCTTATAG 2358 0.4296 MSLAIFLPSILALLSLSHLNGLHAIQLNTSITAGTNSTWKSPSGDFEFGFYLLPNGLFLVGIWFGRIQERTLVWYNTPPVEQNSQIQFTSAGQLLVVYPNGTTAQTIYDGGNGGAATSANMHDDGNFVLNNTNLGPVWQSFNNLTDTILPGQTLQTNQTLHSKGKGPSNYSMGSFMLQMQQDGNLVLKAYQWSDPAYWFTSTLTSNVTLVYNATTALMYLVSGTKNIYSLTNTTPTPVEDYYHRATIDENGNFQQYAYNKRNGSGWSRVWRAVEDPCRVNVVCGVYGLCTSPDNESVKCECIPGYIPLDHQDVSQGCHPPADINYCAETNFELQVFDDTDFQFNTDFFRLASVDLESCKKAVIDDCNIVAATYSPSTSTCVKKRLPLLNARNSSSSKGMKALLKVSGTSKVPKKKNFNVKVFLKVLLAVTATLACFFGALVVYYHPFARRLTRRKKHLNATAIGINFREFTFQELHEATDGFTRILGKGASGKVYRGALIIDGAEIGIAVKKLEKKIEKSEREFMTELKIIGRTHHRNLVRLLGFCIESSHRIIVYELMPSGALPRFLFGERERPQWGQRIEMALGVARGLLYLHEECNTQIIHCDIKPENVLLDVNYTAKIADFGLSKLLNKDQTRTNTNLRGTIGYMAPEWLRSAPITAKVDIYSFGVMLLEIICCRRHVESSQDGKNSEDDDLVLSNWILRCVVNRQLELVMKHDSEVQNDFKKFEEMALVGLWCVHPNPSLRPSMKHVMQMLDGTVEVVVPPLVYDLIMADQGAENPTQSL 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00085 785 PIRSF SRK 1 784 IPR024171 GO:0004674
Spst2g00085 785 Gene3D - 144 281 - -
Spst2g00085 785 ProSiteProfiles Bulb-type lectin domain profile. 24 142 IPR001480 -
Spst2g00085 785 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 559 764 - -
Spst2g00085 785 Gene3D Transferase(Phosphotransferase) domain 1 559 763 - -
Spst2g00085 785 Pfam D-mannose binding lectin 78 161 IPR001480 -
Spst2g00085 785 Pfam Protein kinase domain 484 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00085 785 SMART blect_4 30 144 IPR001480 -
Spst2g00085 785 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 31 766 - -
Spst2g00085 785 CDD STKc_IRAK 486 758 - -
Spst2g00085 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Spst2g00085 785 FunFam S-receptor-like serine/threonine-protein kinase 449 558 - -
Spst2g00085 785 SMART serkin_6 480 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00085 785 Gene3D - 23 143 IPR036426 -
Spst2g00085 785 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 203 IPR036426 -
Spst2g00085 785 Pfam S-locus glycoprotein domain 238 307 IPR000858 GO:0048544
Spst2g00085 785 ProSitePatterns Protein kinases ATP-binding region signature. 486 512 IPR017441 GO:0005524
Spst2g00085 785 Coils Coil 510 530 - -
Spst2g00085 785 Gene3D Phosphorylase Kinase; domain 1 453 558 - -
Spst2g00085 785 ProSiteProfiles Protein kinase domain profile. 480 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00085 785 SUPERFAMILY Protein kinase-like (PK-like) 467 768 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00085 Spst-Chr2 734010 736367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00085 398 776 Receptor kinase-like Gene Family AT4G29050 36.693 1.07e-67 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst2g00085 Pkinase 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00085 - - gmx:102662509 1201.81