Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00081 ATGCTGGCAAATCATTTCCCGAACGGCATCGAAACGGGGAGGCTTGCTTGGTCGCAGATTCCTGATTCTGATGAATCGCAGTTACTCGACGACACCGTTGGCATCCTCAAGAAGAGCGACGGAGGCGGTGTTGAGAGCCTTGACTATGAAGTCATAGAGAATTTTGCTTATCGTGAGGAACAGGCGCAGAGAGGTACAGGACTTGCAGCTGTTTTCATCAATATTGCTGTTGAAAATTTTGCTGGCTGGAAGTTCTCGATGACATTTGATATAATTCAGAAATCATATATTGCTGGATTTTTTGTATATGTTCTGATCAACTTGGCTTTGGTGTATTCCTCTGTATATATCATCACTCAATTTGCACCAGCCGCTGCTGGATCTGGTATTCCTGAAATCAAGGGTTACTTAAATGGAGTTGATACTCACGGCATTCTTCTTTTCAGAACTTTAATTGGAAAGATATTTGGAAGCATTGGTTCAGTGGGTGGAGGTCTTGCTTTGGGTAAAGAAGGTCCTCTTGTCCATACTGGTGCTTGTATTGCTTCCTTGCTTGGACAAGGCCATTTAGCAGTGGCAATTTTTGCAGCCAAAGTTGCAAAAATTGTGGTTGGAGTGGCGATTTTTGCAGCCAAAATTGCAAAAAATTGGCAATCGGAGCTAGCAAATCACACTGACTGTAGATTTATAGCTTCTGTTCCACTCAAGCTGTGCTTGCTGTTCCTAGGTGGATCCACTAAGTATCATCTAAATTCGAGGTGGTTTCAAGTATTCAAAAGTGACCGGGATCGCCGAGATCTTGTAACCTGTGGATGTGCAGCTGGCGTTGCGGCTGCATTTAGAGCTCCAGTTGGTGGTGTGTTGTTTGCTTTGGAAGAGGTTACATCTTGGTGGAGGAGTCAACTCATGTGGCGTGTCTTCTTCACTTCTGCTGTTGTGGCTGTTGTGGTCCGAGCTGCAATGGGGTGGTGTAAGAGTGGAAAATGTGGACATTTTGGGTCCGGTGGATTCATCATATGGGATATATCAGATGGCCAAGAGGATTATTCCTTTGCAGAGTTATTTCCAATGGCTATTATTGGGGTTATTGGAGGTCTACTAGGAGCTTTATTCAACCAGCTTACACTCTATATTACCACTTGGCGACGAAATCATCTTCACAAGAAGGGGAACAGGGTCAAGATCATTGAAGCATGCCTTGTATCCATTTTAACGTCATCCATTTCATTTGGCTTGCCACTTCTAAAAAAATGTAGTCCTTGCCCTGATTCTGATCCTGCATCCGGTATTGAATGTCCACGACCTCCTGGAATGTATGGGAATTATGTAAATTTTTTCTGTAGCAAAGACAAGGAATACAATGATCTTGCAACTATTTTCTTCAATACGCAGGATGATGCCATAAGGAATTTGTTCAGTGCAAAAACAATAAATGAGTACAGTTCCCAAAGTTTATTGACCTTTTTGGTTATGTTTTATGCTTTAGCAGTGGTCACGTTTGGTACTGCTGTGCCAGCTGGTCAATTTGTTCCTGGTATAATGATAGGATCGACGTATGGGCGTCTTGTTGGCATGTTTGTTGTTAAATATTACAGAAAGCTCAACATTGAAGAGGGAACGTATGCTTTGCTGGGAGCAGCATCTTTTCTTGGAGGCTCAATGCGGATGACAGTGTCTCTGTGTGTCATTATGGTTGAAATCTCAAATAACTTAAAATTTTTACCTCTGATTATGCTTGTTCTTCTTATATCAAAGGCTGTTGGTGATGCTTTTAATGAAGGTATCTATGAGGAGCAGGCTCAATTGAGGGGCATTCCATTACTGGAATCAAGGCCTAAATATGAAATGCGGAATATGACAGCAAAGGAAGCCTGTGGGAGTGGAAGGGTGGTCTCTTTCCCCCGTGTTGTTAAGGTTTCAGATGTGCTCTCCATTCTGCGGAGCAACAAACACAATGGTTTTCCAGTGATTGATCACACAAGAAGTGGAGAACCACTTGTTATTGGATTAGTGCTTCGTAGTCATTTATTGGTAATTCTGCAGTCGAAGGTTGACTTCCAGCATAGCCCTTTACCCTCAGATTCCAGAGGTGGGGGCAGGTCAATTAGGCATGATTCTAGTGAATTTGCAAAGCCTGTCTCTAGTAAAGGAATACGTATTGATGATATACATCTAAGTTCAGATGACTTGGAAATGTACATCGATCTTGCTCCATTTTTGAATCCCTCGCCCTATATTGTACCAGAAGATATGTCTTTGACAAAGGTATACAATCTTTTCCGTCAACTTGGTCTACGGCATTTATTTGTTGTTCCTCGTCCATCTCGTGTGCTTGGTTTGATAACGAGAAAAGATTTGTTGATTGAGGACAAAGAAAATGTGAATACGTTAGAGCTTCAGTCAACTAGTGTAAGAATAGGGCATCAGAGTAAAAGATTGACTACAAGGAATGCCGATGTGGAGCGCCCTTTGCTAAACGGACTGCTCCAGAATCAGATACCGGACTAA 2508 0.4238 MLANHFPNGIETGRLAWSQIPDSDESQLLDDTVGILKKSDGGGVESLDYEVIENFAYREEQAQRGTGLAAVFINIAVENFAGWKFSMTFDIIQKSYIAGFFVYVLINLALVYSSVYIITQFAPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGHLAVAIFAAKVAKIVVGVAIFAAKIAKNWQSELANHTDCRFIASVPLKLCLLFLGGSTKYHLNSRWFQVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRAAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFAELFPMAIIGVIGGLLGALFNQLTLYITTWRRNHLHKKGNRVKIIEACLVSILTSSISFGLPLLKKCSPCPDSDPASGIECPRPPGMYGNYVNFFCSKDKEYNDLATIFFNTQDDAIRNLFSAKTINEYSSQSLLTFLVMFYALAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEISNNLKFLPLIMLVLLISKAVGDAFNEGIYEEQAQLRGIPLLESRPKYEMRNMTAKEACGSGRVVSFPRVVKVSDVLSILRSNKHNGFPVIDHTRSGEPLVIGLVLRSHLLVILQSKVDFQHSPLPSDSRGGGRSIRHDSSEFAKPVSSKGIRIDDIHLSSDDLEMYIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVLGLITRKDLLIEDKENVNTLELQSTSVRIGHQSKRLTTRNADVERPLLNGLLQNQIPD 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00081 835 SUPERFAMILY Clc chloride channel 244 610 IPR014743 -
Spst2g00081 835 Gene3D - 629 793 IPR046342 -
Spst2g00081 835 CDD CBS_pair_voltage-gated_CLC_euk_bac 630 787 - -
Spst2g00081 835 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 242 792 - -
Spst2g00081 835 PRINTS Chloride channel signature 123 140 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Spst2g00081 835 PRINTS Chloride channel signature 539 555 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Spst2g00081 835 PRINTS Chloride channel signature 557 576 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Spst2g00081 835 PRINTS Chloride channel signature 595 609 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Spst2g00081 835 ProSiteProfiles CBS domain profile. 740 797 IPR000644 -
Spst2g00081 835 Gene3D Clc chloride channel 65 609 - -
Spst2g00081 835 FunFam Chloride channel protein 732 823 - -
Spst2g00081 835 ProSiteProfiles CBS domain profile. 619 686 IPR000644 -
Spst2g00081 835 PRINTS Plant CLC chloride channel signature 456 472 IPR002251 GO:0005247|GO:0006821|GO:0016020
Spst2g00081 835 PRINTS Plant CLC chloride channel signature 50 58 IPR002251 GO:0005247|GO:0006821|GO:0016020
Spst2g00081 835 PRINTS Plant CLC chloride channel signature 308 318 IPR002251 GO:0005247|GO:0006821|GO:0016020
Spst2g00081 835 PRINTS Plant CLC chloride channel signature 326 333 IPR002251 GO:0005247|GO:0006821|GO:0016020
Spst2g00081 835 Pfam CBS domain 741 788 IPR000644 -
Spst2g00081 835 Pfam CBS domain 637 680 IPR000644 -
Spst2g00081 835 SUPERFAMILY CBS-domain pair 613 787 IPR046342 -
Spst2g00081 835 SUPERFAMILY Clc chloride channel 66 188 IPR014743 -
Spst2g00081 835 Pfam Voltage gated chloride channel 242 588 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Spst2g00081 835 Pfam Voltage gated chloride channel 113 190 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Spst2g00081 835 SMART cbs_1 629 681 IPR000644 -
Spst2g00081 835 SMART cbs_1 743 791 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00081 Spst-Chr2 692601 706102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00081 1 805 Ion Channels AT5G26240 73.245 0.0 1122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00081 K05016 - gmx:100811908 1366.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00081 2 692601 706102 Spst2g00081 2 692601 706102 ECH