Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00067 ATGAACACTTGTTTGGTTGCGCAGGAGGGATCTTTCACCTCGCGCCTCGTCATAATGGTGAGGGTTAGCGTCTTGAATGATGCTCTCAAGAGCATGTACAACGCCGAGAAACGTGGGAAGCGCCAGGTCATGATTAGACCATCCTCCAAGGTTATCATCAAATTCCTCTTGGTGATGCAGAAGCATGGATACATTGGTGAGTTTGAGTATGTTGATGACCATAGGGCTGGGAAAATCGTCGTCGAATTGAATGGGAGGCTGAATAAATGTGGGGTTATAAGCCCCCGCTTTGATGTTGGTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTCCCCTCCAGACAGTTTGGGTTTATTGTCTTGACAACATCGGCGGGTATCATGGATCATGAAGAAGCCAGAAGAAAGAATGTTGGTGGAAAGTATAAACTTGTGTTAGATTTTAAAGATTACGCTTTCCCCCCGTATTCAGACTCAAAATCAGGTTTTAGTACCCGTGGTTTAGTAGAGTAA 516 0.4516 MNTCLVAQEGSFTSRLVIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKYKLVLDFKDYAFPPYSDSKSGFSTRGLVE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00067 171 PANTHER 40S RIBOSOMAL PROTEIN S15A 19 142 IPR000630 GO:0003735|GO:0005840|GO:0006412
Spst2g00067 171 SUPERFAMILY Ribosomal protein S8 22 142 IPR035987 GO:0003735|GO:0005840|GO:0006412
Spst2g00067 171 Gene3D - 88 148 - -
Spst2g00067 171 ProSitePatterns Ribosomal protein S8 signature. 118 135 IPR000630 GO:0003735|GO:0005840|GO:0006412
Spst2g00067 171 FunFam 40S ribosomal protein S15a 19 87 - -
Spst2g00067 171 FunFam 40S ribosomal protein S15a 88 147 - -
Spst2g00067 171 Gene3D - 19 87 - -
Spst2g00067 171 Pfam Ribosomal protein S8 25 142 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00067 Spst-Chr2 580653 588053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00067 19 142 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.774 1.31e-87 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00067 K02957 - gmx:100798674 247.284