Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00064 ATGCATCCTTTTTTCCGCGTTTCATCATCCTATGGTCGTTGCAAGCAAAAGGGCATGGCAAGAGCATTAATGCCATATCTATCAGTATTGTTGCTTTCATGTGGAATAGTAATTCGTGAGTGTGAGGGCCAAGAACCCAAGGCATTGCCTCCAGCAGCGGACAGTTGTGACGGGATTTTCATTTCCTATGACTTTCTCACTCGAACCAAAGAGTTCCCTCACGTGAAGAATGTGACGGCACAGTCGTGGGCCTTCAAATCCACCGCAACAGTTCTAAACACGGGCAAAGAAGTGGTTAAAGCGTGGAAGTTGTTCATAGAGTTTCAACATGACGAGATTCTAGTCTCTGTCAGTGGAGGTATTTTAGATGATGGAACCGAGTTCCCGGCTTCGGTTGGAAATGGAACTACCTTTGTTGGAGCGTCTGTGCCAGACTTGGATAGCGCAATCAACACAGCTCAAGATTTAGACCAAATTCAAGCTGTCATCCAGCTTATTGGCACCCAGTTTGGAGTCAAGCCTCCTACGCCTCCTATGCCAAAAACCATCAAGTTGTTAAACGATGGTTACAGGTGCCCCAAACCTTCTACCCAAAAGAGTTCCATGTATGCATGCTGCAAAAAGGACCCTAAATTCAAGCCTACAGTTCAGAAGACAAAATTCTTGGAACGACAGAAAGGAGATCTTCCCATATCCTACGACGTTACTCAAGTGTATGACAATAATTATATGGTTCAGGTGACGATTGAGAATGAACACTTTTTGGGACGGTTGGATCATTGGAACTTGACCTGGGTGTGGACAAGAGGGGAATTTATATACTCTATGAAAGGTGCATTCACACGTGAGATAGAGTCCACAGGTTGCATCAGTGGTGAGGCAGGAAGGTATTACAGGGACATGGATTTCTCTAAAGTGCTTAACTGTCAGAAGAATCCTATATTGAGTGACTTGCCTCCAGAGAAATATAACGACGATGAAATCGGAAAGATACCTAACTGTTGCAAAAACGGAACTCTTTTACCTATCGTCATGGACCCTAGCAAATCCAAGTCTGTTTTTATAATGCAAGTCTTCAAAATTCCACCTGATTTAAACAAAACTGCGATCTTCCCTCCAGAGAAATGGCAAATAACGGGCATTCTGAACCCGACCTACAAATGTGGATCACCTAGAAGAGTGGAGCCAACACGATTTCCAGACCCTAGAGGACTTGAAGCAACGGTTATTTCCATTGCAAGTTGGCAAATAATCTGCAATATCACTGCGCCAACCAAAAAGAGTCGTTGTTGTGTTTCTTTCTCTTCTTTCTACAATGAGTCTGTGGTCCCTTGCAACACATGTGCCTGTGGCTGTGATGATAATACCAAAAAATGTAATCCCAATTTACCACCAATGCTTCTCCCTCCAGAAGCTCTTCTTGTACCCTTTGACAATAGGTCACAGAAGACAGTTGCTTGGGCCAAACTCAAGCATTTTACCATCCCCAAAAAACTACCATGTCCTGACAACTGTGGAGTCAGCATCAACTGGCATGTGGTTTCCGATTACAAAGGTGGGTGGAGTGGCAGAATCACTCTGTTCAATTGGAAGACTAGCGATTTTGCCAATTGGTACACTGCACTCCAATTCAAGAAGACTCCTCTTGGTTACCAAAAAGCATATTCTTTTAATGGAACATTCATGCCAACGCTCAACCATACTATTTTCTTGCAAGGATTGCAAGGATCAAATTATCTAATAGCTTTAGACAATGGAACAAACCCACCTGTGCCAGGGAAACAACAATCTGTTCTTTCCTTTACCAAGAAGTATTCACAGAATATACAAATTGCAAAAGGCGATGGGTTCCCTTCAAAGGTCTTTTTTAACGGTGAACTGTGTTCCCTCCCTACCCGAATCCCTGTCAGAAGTGGAAATCAACCTACTGTGGATTTAGTATACCAACTACTGCTTTTGGCTTTAGCTTATTCAATTAGTGAACTAGTGTATTGA 1995 0.4301 MHPFFRVSSSYGRCKQKGMARALMPYLSVLLLSCGIVIRECEGQEPKALPPAADSCDGIFISYDFLTRTKEFPHVKNVTAQSWAFKSTATVLNTGKEVVKAWKLFIEFQHDEILVSVSGGILDDGTEFPASVGNGTTFVGASVPDLDSAINTAQDLDQIQAVIQLIGTQFGVKPPTPPMPKTIKLLNDGYRCPKPSTQKSSMYACCKKDPKFKPTVQKTKFLERQKGDLPISYDVTQVYDNNYMVQVTIENEHFLGRLDHWNLTWVWTRGEFIYSMKGAFTREIESTGCISGEAGRYYRDMDFSKVLNCQKNPILSDLPPEKYNDDEIGKIPNCCKNGTLLPIVMDPSKSKSVFIMQVFKIPPDLNKTAIFPPEKWQITGILNPTYKCGSPRRVEPTRFPDPRGLEATVISIASWQIICNITAPTKKSRCCVSFSSFYNESVVPCNTCACGCDDNTKKCNPNLPPMLLPPEALLVPFDNRSQKTVAWAKLKHFTIPKKLPCPDNCGVSINWHVVSDYKGGWSGRITLFNWKTSDFANWYTALQFKKTPLGYQKAYSFNGTFMPTLNHTIFLQGLQGSNYLIALDNGTNPPVPGKQQSVLSFTKKYSQNIQIAKGDGFPSKVFFNGELCSLPTRIPVRSGNQPTVDLVYQLLLLALAYSISELVY 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00064 664 PANTHER COBRA-LIKE PROTEIN 7 39 655 - -
Spst2g00064 664 Pfam COBRA-like protein 243 422 IPR006918 GO:0010215|GO:0016020
Spst2g00064 664 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00064 Spst-Chr2 527334 529545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00064 50 656 COBRA Gene Family AT3G20580 56.260 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00064 - - gmx:100799716 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00064 2 527334 529545 Spst2g00064 2 527334 529545 ECH