Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00063 ATGGCCACACACCAATCTCTGTTAGACAACCCTAGAAAATCCGTTTCCAGAACTGTATGCTTAATCCTCTCTGTAGCTGTTGTGCTGACTTCATCAGCTCTTATTGCATCTTATCTCATAAAACCCACCTCCTTCCTCAACCACACAATCTCTCACCATGTTTGTCAGCATGCAGTTGATACTTCAAACTGCTTAGCACATGTCTTGGAAGTGGTTCAAGATCCGATCTTAACTGCCACACAAAACCACAAACTCGGTTTGCTCCAAGCCTTTTTGATGAAATCCACCTCACACTTTGAGAGGGTGAAGGAGGCAGCCAATGCTATCAAGGTGAGGATGAACAATCCAAGAGAAGAAGCTGCCTTGCGGGACTGCGTGGAGCTGATGGAGTTGTCCATGGACAGAGTTTGGGACTCAAAGATGAGTCTAACTACAGAGACCACTGATTCGCTGCGAGATGCACACACTTGGCTCAGCAGCGTGCTCACGAATCATGTAACTTGCCTGGATGGATTGGAGGAGGCAGGTCGAAGGCTTATGGAGGCAGAGCTTGAGGACTTGATCTCCAGAGCAAGAACCTCTTTAGCCATGGTTGTTGCTGTTTTGCCTCCAAATGGAAAGGTTGAACAGATGATCGATGTGTCACTAAATGGGGAGTTTCCCAGATGGGTAACAAGCAAGGATCGGAAGCTGTTAGAGTCTTCCGCTGAAGACATCAAGGCCAATGTCGTGGTGGCTAAGGACGGGAGTGGTGACTTTGAGACCGTTGCGGAAGCTGTGGCATCAGCACCGGACAAGAGCAAGAAGAGGTATGTCATTCATGTGAGAAACGGAACATACGAAGAGAACGTTGAAATCGGTAAGAAAAAGAAGAACGTGATGCTGGTGGGTGACAGCATGAATAATACTATAATCACCGGAAGCTTGAATTACGTCGACGGAACGGGCACCTTCAGGACTGCTACGGTTGCGGCGGTTGGGGATGGATTCATAGCCCAGGACATTTGGTTTCAAAATACAGCAGGCCCACAAAAGCACCAGGCAGTGGCTCTTCGCGTGGGCGCTGATCAATCGGTGATAAATCGTTGTCGCATGGACGCGTATCAAGACACTCTCTACGCCCACTCCAACAGACAGTTTTACCGTGACTCCTTCGTCACAGGCACCATCGACTTCATCTTCGGAAACGCAGCTGTTGTCTTCCAGAACTGTAGGCTGGAGGTCCGAAAGCCCATGCGTAGTCAGAAAAACATGGTCACTGCCCAAGGACGAACAGATCCGAACCAAAACACTGGAACTTCAATTCAACAATGTTATGTGTCCCCCAGTGCGGATCTTACGCCCGTCATAGACTCTTTCCAAACATTTCTGGGTCGCCCCTGGCAGAACTTCTCTAGAACTGTGGTGATGCAGTCGTTTCTGGACAAGCACATTGACCCAGCAGGATGGTCAGAATGGGATGAGAAACACAAAGACTATTTGGAAACCTTATATTATGGAGAGTACATGAACAGAGGACCAGGTGCTGGTACCAGTCAAAGAGTGAATTGGACTGGTTACCACATAATCCAAACCGCAGCCCAGGCCAGCCAGTTCACTGTAAAACAACTCATTCAAGGTGATGTTTGGTTGAAGAACACCGGGGTCAACTTCATTGAAGGTCTATAA 1668 0.4826 MATHQSLLDNPRKSVSRTVCLILSVAVVLTSSALIASYLIKPTSFLNHTISHHVCQHAVDTSNCLAHVLEVVQDPILTATQNHKLGLLQAFLMKSTSHFERVKEAANAIKVRMNNPREEAALRDCVELMELSMDRVWDSKMSLTTETTDSLRDAHTWLSSVLTNHVTCLDGLEEAGRRLMEAELEDLISRARTSLAMVVAVLPPNGKVEQMIDVSLNGEFPRWVTSKDRKLLESSAEDIKANVVVAKDGSGDFETVAEAVASAPDKSKKRYVIHVRNGTYEENVEIGKKKKNVMLVGDSMNNTIITGSLNYVDGTGTFRTATVAAVGDGFIAQDIWFQNTAGPQKHQAVALRVGADQSVINRCRMDAYQDTLYAHSNRQFYRDSFVTGTIDFIFGNAAVVFQNCRLEVRKPMRSQKNMVTAQGRTDPNQNTGTSIQQCYVSPSADLTPVIDSFQTFLGRPWQNFSRTVVMQSFLDKHIDPAGWSEWDEKHKDYLETLYYGEYMNRGPGAGTSQRVNWTGYHIIQTAAQASQFTVKQLIQGDVWLKNTGVNFIEGL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00063 555 ProSitePatterns Pectinesterase signature 2. 386 395 IPR033131 -
Spst2g00063 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 201 IPR035513 -
Spst2g00063 555 Gene3D - 236 555 IPR012334 -
Spst2g00063 555 Pfam Plant invertase/pectin methylesterase inhibitor 54 190 IPR006501 GO:0004857
Spst2g00063 555 FunFam Pectinesterase 236 555 - -
Spst2g00063 555 NCBIfam pectinesterase inhibitor domain 24 177 IPR006501 GO:0004857
Spst2g00063 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 198 IPR035513 -
Spst2g00063 555 SMART PMEI_2 46 197 IPR006501 GO:0004857
Spst2g00063 555 Pfam Pectinesterase 242 541 IPR000070 GO:0030599|GO:0042545
Spst2g00063 555 PANTHER PECTINESTERASE 23 545 - -
Spst2g00063 555 SUPERFAMILY Pectin lyase-like 240 554 IPR011050 -
Spst2g00063 555 CDD PMEI-like_4 55 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00063 Spst-Chr2 525002 526836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00063 3 555 Carbohydrate Esterase AT1G11580 52.753 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00063 K01051 - gmx:100815836 839.721