Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00061 ATGGCCATCCAACAACCTCTGTTAGACAAGCCTAAAAATTCCGTTTCCAAAACTATCTTACTCCTTTCTGTAATTGCAGTTCTAAGCTCTTCAGCCTTTATTGCTTCTTATCTCTTCAAACCATCGTTTGTCTTCAACAATTTCTCCCTTCACCATGTCTGTGATCACGCACTTGATACTGCATCCTGCTTATCACATGTCTCGGAAGTAACCCAATCTCTTGCATTGACCTCAACAAAAGACCACAAATTCAATTTGCTCAAATCATTCCTAATAAAATACACCTCACACATTGAGAAAGTCAAGGACACAACCAATGCTATCAAACTCAGGGTCAACAATCCGAGAGAGGAAGCAGCTTTGCGGGACTGTGTGGAGCTGATGGACTTGTCCTTGGACAGAGTTTGGAATTCTATGTTGGCTCTAACGAAACAAACCACTGAGTCGCAACAAGATGCACACACATGGCTAAGTAGCGTGCTAACTAATCATGCAACTTGCCTGGATGGATTAGAGGGAGCGGCTCGGAGTGTTATGGAGGCTGAACTTGAGGACTTGATATCTAGGGCAAGAACCTCTCTAGCCATGTTTGCTGGGGCATATTTGCCTCCAAAGGTTGAACAAACAATTGGTGAACCCCTAAATGGGGACTTTCCCTCATGGGTGAGCAGCAGGGATCGGAGGCTTTTGGAGAGTGTGGTTGGGGACATCAAGGCCAATGTTGTGGTGGCTCAGGATGGCAGTGGCAAGTTTAAGACTGTCACTGAGGCTGTGGCAACCGCACCAGACAACGGTCAGACAAGGTACGTTATTTATGTGAAGAAGGGAACGTACAAAGAACATGTTGAAATTGGTAGTAAGAAGAAAAACGTGATGCTGGTGGGTGACGGTATGGATGCAACTATAATCACCGGCAGCTTGAATTTCATCGACGGAACAACAACCTTCAACAGTGCCACCGTTGCTGCTGTGGGTGATGGATTTATAGCCCAAGACATATGGTTTCAAAACACAGCGGGAGCGGAGAAACACCAAGCAGTGGCTCTTCGCGTCGGCGCGGACCAATCCGTCATAAACCGTTGCCGCATTGATGCCTTTCAAGACACTCTCTATGCCCATTCCAACAGACAGTTCTACCGAGACTCTTTTATCACTGGCACCATTGACTTCATCTTTGGAAATGCCGCTGTTGTCTTCCAAAAGTGCAACTTGGTGGCCCGAAAGCCCTTGAGTAACCAAAACAATATGGTGACCGCGCAAGGAAGAGAAGATCCAAACCAAAACACAGGGACTTCTATTCAACAGTGTAACCTAACGCCCAGCTCAGATCTTAAGCCTGTTGTGGGTTCCATCAAAACTTTTCTGGGTCGACCATGGAAGAAGTACTCCAGAACTGTTGTGATGCAGTCGTCAATAGACAACCATGTTGACCCAACAGGATGGGCCGAGTGGGATGCCCAGAGTAAGGACTTTTTGCAAACGTTGTATTATGGAGAGTACATGAACAGTGGAGCAGGTGCTGGAACCAGCAAGAGAGTGAATTGGCCTGGTTACCATATCATCACAAGTGCAGCGGAGGCCAGCAAATTCACTGTAACACAACTCATCCAAGGAAATGTTTGGTTGAAGAACACCGGGGTCAACTTCATCGAAGGCCTCTAA 1662 0.4657 MAIQQPLLDKPKNSVSKTILLLSVIAVLSSSAFIASYLFKPSFVFNNFSLHHVCDHALDTASCLSHVSEVTQSLALTSTKDHKFNLLKSFLIKYTSHIEKVKDTTNAIKLRVNNPREEAALRDCVELMDLSLDRVWNSMLALTKQTTESQQDAHTWLSSVLTNHATCLDGLEGAARSVMEAELEDLISRARTSLAMFAGAYLPPKVEQTIGEPLNGDFPSWVSSRDRRLLESVVGDIKANVVVAQDGSGKFKTVTEAVATAPDNGQTRYVIYVKKGTYKEHVEIGSKKKNVMLVGDGMDATIITGSLNFIDGTTTFNSATVAAVGDGFIAQDIWFQNTAGAEKHQAVALRVGADQSVINRCRIDAFQDTLYAHSNRQFYRDSFITGTIDFIFGNAAVVFQKCNLVARKPLSNQNNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVVGSIKTFLGRPWKKYSRTVVMQSSIDNHVDPTGWAEWDAQSKDFLQTLYYGEYMNSGAGAGTSKRVNWPGYHIITSAAEASKFTVTQLIQGNVWLKNTGVNFIEGL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00061 553 PANTHER PECTINESTERASE 27 543 - -
Spst2g00061 553 FunFam Pectinesterase 234 553 - -
Spst2g00061 553 SUPERFAMILY Pectin lyase-like 238 552 IPR011050 -
Spst2g00061 553 Pfam Plant invertase/pectin methylesterase inhibitor 50 188 IPR006501 GO:0004857
Spst2g00061 553 Gene3D - 234 553 IPR012334 -
Spst2g00061 553 NCBIfam pectinesterase inhibitor domain 28 178 IPR006501 GO:0004857
Spst2g00061 553 FunFam Pectinesterase 3 51 200 - -
Spst2g00061 553 CDD PMEI-like_4 56 198 - -
Spst2g00061 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 199 IPR035513 -
Spst2g00061 553 Pfam Pectinesterase 240 539 IPR000070 GO:0030599|GO:0042545
Spst2g00061 553 ProSitePatterns Pectinesterase signature 1. 265 284 IPR018040 -
Spst2g00061 553 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
Spst2g00061 553 SMART PMEI_2 45 196 IPR006501 GO:0004857
Spst2g00061 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 197 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00061 Spst-Chr2 513332 515093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00061 5 553 Carbohydrate Esterase AT1G11580 56.964 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00061 K01051 - gmx:100815836 928.317