Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00055 ATGTTTTTTGTTGGGATCATGATCATGATCATGGTCAAACATAGACCTTGGGCAGTGCTTTTGTTCACCATGTCTATGTTTATATTTCTATTCATCTCGTCTCTCAATCGCGTTTCTGGAGAAGACCCTCTTGATATATACTGTCCGAGTGAATTCCCATTGTACGACCTCAATAGTTCGTTCCATAACAACCTCAACCTGGTTCTGGGGTTGCTTTCTTCCGACAACGCTTCGGAGGGTGGTTTCTACAGCACATCTGAAGGAGAAGAGCCAAACAAAGTGTATGGGCAATCACTGTGCAGAGGGGACGTCACCAACTCCACGGTTTGCAAAGAGTGCATTGAGAAAGCAAGCCAAGATGTGATGAATAGTTGCAGAAGTGAAAATGCAATGATATGGTATAACCTTTGCCAAGTACGCTACTCCTTTCAGAATTTTGATGTCGTGGCTTACACTGGGAAGTATCCGAAGCAGAATTATGAGGAGAAGAATGTCTCTGATCCAACCCGATTTAGGGAATACTTGACTTTTTTAATGAACAATCTCTCAAACGAGGCTGCTTTCAATCCTGGGAGGAACATGTTTGCGGCTGGGGAAGTTGACTATCCTGGGAACAAGACAATTTATGGGTTGGTCCAATGTACGAGGGACATGTCCCCCACAGGTTGTAGTAGTTGTTTCAGTTCCGCCTTCACAGAACTTACTACATGTTGTTCCTACAGAGAAGGTGGGATTATTCTTAGTCGTACTTGCAATATGAGGTTCCAGTTGTCTCAGTTCTTCAATGCTTCTTCTGCATATCGTCTGGTTTACCCAACTTCCACAGGATGGAAATGGAAGACGTGGATGTTTGTGTTGATTATATGTGGGTCAATTTTTACATTGGCACTTGTTATTGGGCTTATTGGGCTGGGCATTGCTTGCTTCCGAGGAAAGAAAGATAGAGACCAAGATGAAGAAATAAGTGAAAGAACGCTATTAGAAGAGTTGACTACCCCCAGGCATGTAGCAGTCACACAAGAAGGTGACTTGATTAGTTCCGAAGAACTGTTGTTCATGACTTTAGCTTCCATCAGGGTCGCTACAGATGACTTTTCTGATACAAATAAGCTGGGGCAAGGAGGGTTTGGTGCAGTGTACAAGGGTGTTCTGCCAGATGGTAATGAAATAGCAGTTAAAAGATTGTCGAGAAAATCTTGGCAAGGCATAGAGGAATTTAAAAATGAAATCGTGTTGATTGCCAAACTTCAACACAAGAATTTGGTGAGGCTGTTAGGTTGTGCCTTGGATGGAGAAGAAAAGTTACTCATATATGAATTCATGTCAAACAAAAGCCTTGATCAACTTATCTTTGATCAAGAAAAACGTTCAAAACTTGATTGGAAGACATACTACGGTATTATCAGTGGCATAGCGAGAGGACTACTTTATCTCCACGAGGAGTCTCGCCTTAAAATCATTCACAGAGACCTAAAGCCAAACAATGTCTTGCTAGACCACGAGCTACTTGCCAAAATATCAGATTTTGTGGATATATGGCTCCGGAGTATGCAATGGAAGGATTGTTCAGTGTTAAATCGGATGTGTTCAGCTTTGGCGTGGCGACTGTGGAACGAAGGAAAAGAATTGGACTTTGTGGATCCAGTGGTGTTGGAATCAGGCCTGGGCTCTGAAGTTGTAAGATGCATGCACATTGGGCTTCTGTGCGTGCAGGAAAATCCGGAACATAGGCCCACCATGTCCAATGTGATGCTTCTCCTGGGAAGTGAATCAGTGGGTCTTCCCCAACCAAAACAACCTGCTTTTGCTCTGAGTAGGGTGCTTCATCTCGATCCATCTACGACAACCAATCCTTCAGACAAGGAGATTGTATTTTCTGATATTTTACCTCGATGA 1896 0.4309 MFFVGIMIMIMVKHRPWAVLLFTMSMFIFLFISSLNRVSGEDPLDIYCPSEFPLYDLNSSFHNNLNLVLGLLSSDNASEGGFYSTSEGEEPNKVYGQSLCRGDVTNSTVCKECIEKASQDVMNSCRSENAMIWYNLCQVRYSFQNFDVVAYTGKYPKQNYEEKNVSDPTRFREYLTFLMNNLSNEAAFNPGRNMFAAGEVDYPGNKTIYGLVQCTRDMSPTGCSSCFSSAFTELTTCCSYREGGIILSRTCNMRFQLSQFFNASSAYRLVYPTSTGWKWKTWMFVLIICGSIFTLALVIGLIGLGIACFRGKKDRDQDEEISERTLLEELTTPRHVAVTQEGDLISSEELLFMTLASIRVATDDFSDTNKLGQGGFGAVYKGVLPDGNEIAVKRLSRKSWQGIEEFKNEIVLIAKLQHKNLVRLLGCALDGEEKLLIYEFMSNKSLDQLIFDQEKRSKLDWKTYYGIISGIARGLLYLHEESRLKIIHRDLKPNNVLLDHELLAKISDFVDIWLRSMQWKDCSVLNRMCSALAWRLWNEGKELDFVDPVVLESGLGSEVVRCMHIGLLCVQENPEHRPTMSNVMLLLGSESVGLPQPKQPAFALSRVLHLDPSTTTNPSDKEIVFSDILPR 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00055 631 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Spst2g00055 631 SMART serkin_6 365 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00055 631 FunFam Cysteine-rich receptor-like protein kinase 10 329 440 - -
Spst2g00055 631 Gene3D - 153 260 IPR038408 -
Spst2g00055 631 Gene3D - 48 146 IPR038408 -
Spst2g00055 631 Gene3D Phosphorylase Kinase; domain 1 329 440 - -
Spst2g00055 631 Pfam Protein kinase domain 366 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00055 631 FunFam Cysteine-rich receptor-like protein kinase 10 156 260 - -
Spst2g00055 631 ProSiteProfiles Gnk2-homologous domain profile. 42 146 IPR002902 -
Spst2g00055 631 Pfam Salt stress response/antifungal 163 256 IPR002902 -
Spst2g00055 631 Pfam Salt stress response/antifungal 55 143 IPR002902 -
Spst2g00055 631 ProSiteProfiles Gnk2-homologous domain profile. 153 260 IPR002902 -
Spst2g00055 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Spst2g00055 631 Gene3D Transferase(Phosphotransferase) domain 1 441 510 - -
Spst2g00055 631 Gene3D Transferase(Phosphotransferase) domain 1 518 592 - -
Spst2g00055 631 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 533 611 - -
Spst2g00055 631 SUPERFAMILY Protein kinase-like (PK-like) 347 586 IPR011009 -
Spst2g00055 631 ProSiteProfiles Protein kinase domain profile. 365 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00055 631 FunFam Os07g0541700 protein 441 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00055 Spst-Chr2 466280 469676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00055 534 620 Receptor kinase-like Gene Family AT4G05200 38.636 7.65e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst2g00055 Pkinase 2.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00055 - - vun:114173511 860.136