Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00054 ATGGCTCCGGAGTATGCAATGCATGGAGAGTTCTCTGTTAAGTCTGACGTGTACAGTTTTGGAGTCCTCCTTTTGGAGATTGTAAGTGGCAAGAAGAATAGCTCTTTCTATCAAACGGATGGTGCTGAGGATCTAATGAGCTATGCTTGGCTTCTTTGGAAGGATGGAACACCCTTGGAACTGATGGATCCCATAATAAGAGAATCCTACAACCAGAATGAAGTTATCAGAAGCATCCATATTGGTCTGCTCTGTGTCCAAGAAGATCCAGAAGACAGACCTCCCATGGCAACAATAGTTCTTATGCTAGATAGTAACACTGTTACTCTACCAACTCCTAAGAGGCCTGCATTTTTCATCCACAGTGGAACCGATACAACCATGCCAAAGGTGCTGCAATTTGATCAATCTATAACAAAAACATCACCAGTGTCTATCAACGAGATGTCCATTAGCGAAATGGATCCTCGATAA 474 0.4283 MAPEYAMHGEFSVKSDVYSFGVLLLEIVSGKKNSSFYQTDGAEDLMSYAWLLWKDGTPLELMDPIIRESYNQNEVIRSIHIGLLCVQEDPEDRPPMATIVLMLDSNTVTLPTPKRPAFFIHSGTDTTMPKVLQFDQSITKTSPVSINEMSISEMDPR 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00054 157 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
Spst2g00054 157 SUPERFAMILY Protein kinase-like (PK-like) 1 128 IPR011009 -
Spst2g00054 157 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00054 157 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 157 - -
Spst2g00054 157 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Spst2g00054 157 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00054 Spst-Chr2 462558 463150 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00054 1 157 Receptor kinase-like Gene Family AT4G23140 57.595 6.77e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst2g00054 PK_Tyr_Ser-Thr 4.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00054 - - pvu:PHAVU_002G049500g 297.745