Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00040 ATGAGGGGTGGGGAGGAGAGACAGACGGTGACAGGGATTCGGAAGAAGGGAAGCGGAGTAAGGCAATGGCTGGTCCTCGACGGCAGAGGGGAGACGGAGGTGGTGGAGGCAGGGAAGCACGCCATCATGAGGCGCACAGGCCTCCCCGCCCGTGACCTCCGCATATTGGACCCTCTCCTCTCCTACCCTTCCACCCTTCTCGGCCGTGAGAGGGCCATCGTCATCAACTTGGAGCACATCAAGGCCATCATCACCGCCCAGGAGGTCCTCCTCCTCAACTCACGTGACCCCTCCGTCACCCCCTTCGTCCAGGAGCTCCAGGCCAGGATCCTCCGCCACCACCAGGCCTCCTCCTCTTCCAAACACCCCGACCACCACCCTGACCCTGACCCTGACCCTGACCCTGACGCCATCAAGATTCTTCCCTTCGAGTTTGTTGCCCTCGAGGCCTGCCTTGAAGCCGCCTGTAGCGTATTGGAAAACGAGGCAAAGACGTTGGAGCAGGAGGCTCATCCCGCCTTGGACAAGCTCACATCCAAGATTAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAGCCGATTAGTTGCCATCACTGGTCGTGTTCAGAAGGTGAGGGACGAATTGGAGCACTTGCTGGATGACGATGAAGATATGGCTGAGATGTATCTGACCGAAAAGTTATCTGAACAGCAGTTGGAAGAAAGCTCTTCAGCATCATCCATGAATGAGCAAGACGAGGAGGATATAGACCCCAGGACCGCTCCCGAAATATCCTTTGATGCTGGGGTACCCGTTGTGGGTTATGAGGATCATCACAATGTTTTCAATGTTCATGGTAGGGACAGCCATGGAACCCGGGGTAGCACCTACAGTGCCATCACCAAGCAACTTGATGTCGAGGAGCTTGAAATGCTCTTGGAGGCTTACTTTGTGCAGATCGATGGCACCTTGAACAAGCTCTCTACGCTGAGGGAGTACGTTGATGACACGGAGGATTACATCAACATCATGCTGGATGACAAACAGAACCATCTTCTCCAAATGGGAGTCATGTTGACCACAGCAACTCTGGTAGTGAGTGCCTTTGTTGTTGTGGCCGGAGTTTTTGGCATGAATATTCACATTGACCTATTTGATTCCGATAAATCTGGGATGACAGAATTCCTCTGGACTGTTGGTGGTAGTGCTGCAGGGACCATATTCTTGTATGTGGTTGCCATTGCCTGGTGTAAGCAAAAACGCTTGCTAGAGTAA 1260 0.531 MRGGEERQTVTGIRKKGSGVRQWLVLDGRGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRERAIVINLEHIKAIITAQEVLLLNSRDPSVTPFVQELQARILRHHQASSSSKHPDHHPDPDPDPDPDAIKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKLSEQQLEESSSASSMNEQDEEDIDPRTAPEISFDAGVPVVGYEDHHNVFNVHGRDSHGTRGSTYSAITKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGVFGMNIHIDLFDSDKSGMTEFLWTVGGSAAGTIFLYVVAIAWCKQKRLLE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00040 419 CDD Mrs2_Mfm1p-like 23 417 IPR039204 -
Spst2g00040 419 Gene3D - 9 94 - -
Spst2g00040 419 Coils Coil 149 169 - -
Spst2g00040 419 MobiDBLite consensus disorder prediction 113 136 - -
Spst2g00040 419 FunFam Magnesium transporter MRS2-1 11 94 - -
Spst2g00040 419 MobiDBLite consensus disorder prediction 117 136 - -
Spst2g00040 419 Gene3D Magnesium transport protein CorA, transmembrane region 97 347 - -
Spst2g00040 419 MobiDBLite consensus disorder prediction 230 257 - -
Spst2g00040 419 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 9 418 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00040 Spst-Chr2 377399 380410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00040 23 419 MRS2 Gene Family AT3G19640 65.909 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00040 - - gmx:100819578 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00040 2 377399 380410 Spst2g00040 2 377399 380410 ECH