Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00013 ATGGGGAGCATCTACTTCTTGCTAGTATCTGCTCTGTTGCTTCATTCGTTCATGGTAATTGGATCGGGAAAAGAAGCAGTGGAAATTGTCATAGCGAATGGTTATCCGTATGCCTCTCCTCCTCCCCCTACATGCCACCCTCCGGTGAAACGGTTGGAGAGAGGGCGCAAAACTCTGGTGGATTTCACACGTTCAGTGGACGAAAACGAATATACTCGTGCGTGGAGGGGGAGAAACCCATGTAACTTCAAGGGGGTACGATGTGCGTCGTATCCAGACGCAGAAAAGGAATTGGCGATTGCGGGAATAGATCTGAATGGAGCTGGGCTGTCTGGAAAAAACCGCACACCGCTGCTCCTCTCGGGCCTCCTGGACAGGATACCAGAGCTCACCTTCTTCCATGTCAACTCCAACAACTTCACCGGAGGCATCCCAACTGAAATCACCCAGTACAAATATTTCTACGAGCTGGACCTCAGCAACAACAAGCTCAAGGGGGAGTTTCCAAAGGAAGTTCTCCAGTCCACGCAGCTGGTTTTCCTGGACCTCAGGTTCAATTCTCTCTACGGCCCCATTCCGCCGCAGCTCTTTCTCATGAAATATCTCGATGTCATTTTCATCAACAACAATCAATTCACTGGCACTCTCCCCGATACCTTTGCCTCCACTCCTGCAAGATTCCTCACATTTGCCAACAACCAACTCACCGGTCCAATCCCCCCTTCCATCGGCTCTTCCAAAAACCTCACCGAACTCCTCCTCTTGGGCAACCACTTCCAGGGCTGCTTGCCCTACCAGATTGGCCTCCTCCACAAGGCCACCGTCTTTGACGTCAGCAACAACTGCTTGACGGGCCCCATCCCACACTCCTTCGCCTGCTTGGATAGCATCCGCTACCTCAACTTGGACCACAACCGGTTCTACGGTGAAGTTCCCGAGACGGTGTGTCAGCTCCCAGGGCTCCGCAACAGAGGCAACTTCTCCTTGTCGGACAACTATTTCACCCAGGTTGGCCCTGCATGCAGGAGCCTCATCGACAACAATGTCCTCGACGTCAGCAACAATTGCATCCTCGGCCTTCCCAATCAAAGGCCCCATGACCAATGCTCAGAATTCTTCTCCGACCTCCAGCCCTGCCCCGATCGCAAGTCTCTCAATTACGTCCCATGCAAAAAATACTATCCCCGCACCCACGCCGCCTCCGCTCCTCCTCTTCCTCCTCCGGTCACTTACAACTCTCTCCACCCCCATCTTCACCGCTAG 1263 0.5329 MGSIYFLLVSALLLHSFMVIGSGKEAVEIVIANGYPYASPPPPTCHPPVKRLERGRKTLVDFTRSVDENEYTRAWRGRNPCNFKGVRCASYPDAEKELAIAGIDLNGAGLSGKNRTPLLLSGLLDRIPELTFFHVNSNNFTGGIPTEITQYKYFYELDLSNNKLKGEFPKEVLQSTQLVFLDLRFNSLYGPIPPQLFLMKYLDVIFINNNQFTGTLPDTFASTPARFLTFANNQLTGPIPPSIGSSKNLTELLLLGNHFQGCLPYQIGLLHKATVFDVSNNCLTGPIPHSFACLDSIRYLNLDHNRFYGEVPETVCQLPGLRNRGNFSLSDNYFTQVGPACRSLIDNNVLDVSNNCILGLPNQRPHDQCSEFFSDLQPCPDRKSLNYVPCKKYYPRTHAASAPPLPPPVTYNSLHPHLHR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00013 420 MobiDBLite consensus disorder prediction 401 420 - -
Spst2g00013 420 Pfam Leucine rich repeat 248 307 IPR001611 GO:0005515
Spst2g00013 420 Gene3D Ribonuclease Inhibitor 53 224 IPR032675 -
Spst2g00013 420 FunFam Leucine-rich repeat receptor protein kinase EMS1 122 218 - -
Spst2g00013 420 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 25 404 - -
Spst2g00013 420 FunFam Leucine-rich repeat receptor protein kinase EMS1 219 314 - -
Spst2g00013 420 Gene3D Ribonuclease Inhibitor 225 387 IPR032675 -
Spst2g00013 420 SUPERFAMILY L domain-like 80 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00013 Spst-Chr2 197818 199080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00013 51 374 Leucine-rich Repeat extension Gene Families AT4G13340 41.718 2.11e-72 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00013 - - gmx:100795489 602.438