Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03713 ATGGTGAGCATTCAATCTCGTTGCACCGTCTTTCCCTCAGAAACCACCCCCTATGAAAAACTGTTTTCCTTGTGCGAGCAAATGAAGCTTCGTACTCACGCACCACTCCTTTACGTGTACAAGCCACACCCTTATCACCATGCATCAAATTTTGTTGACACTTTGAGACACTCTCTTGGCCAAGCCTTGACAATCTATTACCCACTTGCGGGTAGGTTGATATGGATTCAAGGGGGGCGATGGGAGCTTCATTGCAACGCCAAGGGTGCACAACTATTGGAAGCCAATTGTAAAGACGTGAATTTGGATGATTTGGGTGATTTTGTGCCTACCCATTTGGTGTCACAGCTCATACCAAACATTGATTATGATGTTCCCATTGAGGACACACCCTTGTTGGTTGCGCAACTTACGAGGTTCCCTTGCGGTGGCGTTACCATTGGGGTGGCTCTGTGTCGCGGTGCCATTGACGGAACTGCAACCATGCGGTTCATGAGGTTGTGGGCCAAGTTGGCTAGGAGGGAGAACTTGGAGCACGTGGAAATGGTACCATGCAATGATCGAAGTATTTTGAATTCGTACATGGCTCATTCGGGGTTGCACGATCATTCGGAGTTTCACACTCCTTCTCCTTGGTTAGGTTCTTTGGGGAAAGACACCAAGGCAGTGGTTGCAATAGTGAAGCTCACGGATGAACAAGTGAAGAAACTGAAACACAAGGGGAATCACGTTAACATAAACTCTACTAGTCCTGGTCCTAGTTCAACCCCTTATTCAACTTTTGAGGTTATCTCAGGGTACTTGTGGAGGTGTGTTAGTAAAGCACGTTATGCTGGGAAAAGAGACCAACCTACGAGGTTGTCCACTTTGGTTAATTGTAGGCACCGAATGAGGCCACCTCTTCCTGTTAATTATGCAGGGAATACAGCATTTCCCACAGTGACACCAACATGCTCTTTTGGTGAAATCATTCATAGGCCTTTGAGTTATGCGGTTGGGAACGTTAGGGTGGCACTTGAAAAAGTGACGGGGGAGTTTGTAAGGTCAGCACTTGATCACATATCAAGGGAGAAAGACATGAATTTGATTAGGTACAATTTTCATTACCCAGCCCCAAGTGTGCATAAGGGACCGTACAAGGGGAACCCGAACCTTTTTGTTGTCAGTTGGATGAATTTCTCCTTCAAGGATGCGGATTTTGGATGGGGGGAACCCTTGTATTTTGGTCCCGGGTACATGGATTCTGAAGGAAAAGCATTTCTTATGAATGAGGCCAATGGAGATGGCCTCATTGTGGCCATATCCTTGGAAGCATCTCACATGGATGGTTTCAAAAAAGTGTTCTATGAAGATATCGATCAGGAATCTCTCATTTCAAAACTGTGA 1386 0.4596 MVSIQSRCTVFPSETTPYEKLFSLCEQMKLRTHAPLLYVYKPHPYHHASNFVDTLRHSLGQALTIYYPLAGRLIWIQGGRWELHCNAKGAQLLEANCKDVNLDDLGDFVPTHLVSQLIPNIDYDVPIEDTPLLVAQLTRFPCGGVTIGVALCRGAIDGTATMRFMRLWAKLARRENLEHVEMVPCNDRSILNSYMAHSGLHDHSEFHTPSPWLGSLGKDTKAVVAIVKLTDEQVKKLKHKGNHVNINSTSPGPSSTPYSTFEVISGYLWRCVSKARYAGKRDQPTRLSTLVNCRHRMRPPLPVNYAGNTAFPTVTPTCSFGEIIHRPLSYAVGNVRVALEKVTGEFVRSALDHISREKDMNLIRYNFHYPAPSVHKGPYKGNPNLFVVSWMNFSFKDADFGWGEPLYFGPGYMDSEGKAFLMNEANGDGLIVAISLEASHMDGFKKVFYEDIDQESLISKL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03713 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 448 - -
Spst1g03713 461 Gene3D - 1 208 IPR023213 -
Spst1g03713 461 Gene3D - 215 451 IPR023213 -
Spst1g03713 461 Pfam Transferase family 1 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03713 Spst-Chr1 46946901 46948286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03713 2 450 Monolignol Biosynthesis Gene Families AT5G48930 35.153 6.13e-80 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03713 K13065 - gmx:100775549 739.569