Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03698 ATGCGGGGCCCACCCAAGTATAACACCCCGAAGGAGGCAAGTCCGTCTCAGCTTGATCAAGTGCGAGTTGAGCATCTTCGTTGGGCGAGTAGGCACCCCATCATCACCCTGTCAGTTGTCTCAGCAGTCACCAATAAGTTCTCAGTAGTGGAATTCAAGATGATTAGGTCTTTTGTTGGAAAGATACAAAAGGGTGTCTCACAAATTGGGCCTGGAAAGCCTGCACTCAACTACGTGAATGAAAATCAATTGAAGACCATAAATGTTGTGCCAGGTGATGTTAGTAAAGGGTATTTTGCTGTTATTGCAATCAAAGATGGAGAAATAAAAAGGTTTGTTGTGGAGTTAGATTACTTGACTAATCCTGCATTCTTGGGACTCTTGGATCAAGCTGGAGAAGAGTATGGTTTCAATCAGCAAGGAACTCTTGCAGTCCCTTGTCGGCCTCAGGAATTACAGAAGATTCTAGATGGTTGGAGAATTAGACCAGATCGCGTCAAAAGTTCAGGAAGGGATATTTATGTTCCTAAGTTCCCATGA 540 0.4389 MRGPPKYNTPKEASPSQLDQVRVEHLRWASRHPIITLSVVSAVTNKFSVVEFKMIRSFVGKIQKGVSQIGPGKPALNYVNENQLKTINVVPGDVSKGYFAVIAIKDGEIKRFVVELDYLTNPAFLGLLDQAGEEYGFNQQGTLAVPCRPQELQKILDGWRIRPDRVKSSGRDIYVPKFP 179
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03698 179 Pfam Auxin responsive protein 88 156 IPR003676 GO:0009733
Spst1g03698 179 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 80 155 IPR003676 GO:0009733
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst1g03698 Spst-Chr1 46744132 46746231 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03698 91 163 Calmodulin-binding Proteins AT3G43120 36.986 8.09e-11 56.2