Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03697 ATGAATTCCTCCAACTTCGAAACCATTGATTCCATTATCATAGACTTGAACAACGATCTCAAGGCCTGTTTCAATAGAACTACGTACCACGGTTCCGCCCTTTGGCTGGAAAATTCCGTGGAGAAAACACTTCCTTCATTTGTTCTCCAATTTGCCATTATCCTAGCACTCAACCGCTTTCTGCTCGTTCTTGCAGAACTATACCATGTACCTCGTATTGTTGCCAATATTTTTACTGGTTTTCTGATAGGTCCATCTATTCTGGGACGTTGGAAACCTTTTCTGCAACACCTATTTCCTTTCAGCAACGTCATACCATTGGAGACGGTGGGATCGGTGATCCTTGTTTACTACCTGTTCTTGGTGGGCCTAGAGATAGACTTGAAACCAATAATGAGGTTGCACAAAAAGGCCACAGTTATAGCCATTGCGGGCACAATCTTCCCCATACCGATAGGGTTTGGCTTGTACTACATGCTTGTCACCGACATGGCCCGAAAACCTTTGTCCAGTGAAAACGTTAGACCAAAGGGTGCAATATTATGGGGAATCACCCTTTCTTGCAGCAGTGAGTTCCCTGAGATTGCAAAGATCCTTTCAGATCTTAAGCTTCTCCTCACGGAGAATGGACAACTGGCTCTCACAGCTTCTCTCATCAACGACTTAGTTTCATGGACCCTTCTTGTGTTGGTCCTAACACAATTCTACCACGCTTCTGTGGCATCATTTATCATCACTTTGTTGATTGTGATAGTGTGTTTTGTGGCACTTAACCATTTTTTCAAGTGGCTATTCAACAATGTGGGAACGGGGGATAGAGAGTTCCTTGATTCACAAGTCATATTCGTGCTGCATGTGGTTTTGGTTATTGGGTTGTTAACCGATGGATTGGGTGTGCTTTCCATAACTGGGGCTTTCTTTTTGGGTGTTCTGATCCCTCAGGGGGCGCTTAACAATACCGTGGAGGACAAGGTTCATGACTTTGTGGCTATTTTCATGATGCCTTTGTTCTTTGTAGCTGTTGGAGAGAGGATTATAATCCAAGACTTGGCCTTGGACACACATTGCACAACTGTGGTGGCAGTGGTTGTGTTGGCCTTGTTGACGAAGATGGTGTGCACTATGGCGGTCGCTTGGTCCTACCAGATGCCGCACATGGAAGGATTATCCCTTGCCCTCCTCATGAACACTAAAGGAATCATGCCATTGATCATTCTCTGCGCCGGCAGGGACAGACGCGAACTGGACAACCAAACCTTTGGGGTGATGCTGTTGGGCTGCTGGTTAATGACAATTCCTGTGGGACCTGTCTCATCAGCTTTAATAAAAGCCTTCAAAAGCAGAATGGTTATGGGAGGCCAACGCAGGATGCAAGACACACAACCAGACTCACCCCTCAGACTACTTGCCTGCATCCACACAAAGCGCGACGCCAAGGTGATTATAGACCTCTTAAAAGCGTCGTGTCCCTCTGTGAGAACCCCAATCCAAGTTCTAGCAGTGGAACTGAGCAAAATGACCAACCGCCCTGCCTCATCACTCATCATAAGGGACGCTCGAAAACCATCCTTCACATCAAAGTCTTTGAAGAAAGACTCCGAAGACACCCTTGGATGCTTCGACAATCTCAGCCAAGCCATCTTCGCAGAGAAAATGAGAATCATCTCAGACTATAACTCTATGCACACGGACATCCTGAACCTCGCAAGACGCAGAGGTGTGACACTTATCCTATCCACATTCCACAAGCAACCAACCTACGATGGTTTAGGAGCAGGTGCTGCAACTGCTAGAGCTGTCAACATCATCAACCGTGACCATGCAAGAAAAGACGAGAAGAAAGTGGTGTCAGAGAATCTAGTTAGAGACGCATCGTGTTGTGTGGCCATATTTGTGGATAGAGGGGTGAATCACAAGCGTTCCAAGGAGCTACGTGTGGCTATGTTCTACGTTGCTGGTGCTGATGACCGTGAAGCGCTCTCTTATGCATGGAGAATGACTAGGAGTTCTGAGGTGAATTTAACGTTGGTGAGGCTTGTTTGGGAGAACCCTAATGATGAGTTTGACGAAGCGGACAAAGAGTTCATCAAGGGGTTTAAGCAACAAATGGGGGACTCGCCAAGGGTGAGGTATTTGGAGAAGGTGGTGAGGGATGAGAGGGAAACAGTTAAACTTTTGGACAAGATAGGGAACAAAGGTTTTGATTTGTATGTGTTGGGAAGAGGGCATGGGAGGAAGATGTCATTGGCACAAACGGTGGATCCTGTGTTGGAGGAGCCTGTGTTAGGACCTCTTGGGGATGCTTTGACGGATTTGAACTCTGCAGCTAAGACCTCTATTTTGATATTCCAAAGACAGGTTGAACATGTTGAAGGGAGTGTGAGGTCTACATCATCTGCTTATGAGAAAGTGTTTGATGGCATGGTGGAGCAGAAGTTAATGTGCCCTCCACCGAGGTCTCCGGTGATTTTAAGTCAGTTTGATTGA 2487 0.4644 MNSSNFETIDSIIIDLNNDLKACFNRTTYHGSALWLENSVEKTLPSFVLQFAIILALNRFLLVLAELYHVPRIVANIFTGFLIGPSILGRWKPFLQHLFPFSNVIPLETVGSVILVYYLFLVGLEIDLKPIMRLHKKATVIAIAGTIFPIPIGFGLYYMLVTDMARKPLSSENVRPKGAILWGITLSCSSEFPEIAKILSDLKLLLTENGQLALTASLINDLVSWTLLVLVLTQFYHASVASFIITLLIVIVCFVALNHFFKWLFNNVGTGDREFLDSQVIFVLHVVLVIGLLTDGLGVLSITGAFFLGVLIPQGALNNTVEDKVHDFVAIFMMPLFFVAVGERIIIQDLALDTHCTTVVAVVVLALLTKMVCTMAVAWSYQMPHMEGLSLALLMNTKGIMPLIILCAGRDRRELDNQTFGVMLLGCWLMTIPVGPVSSALIKAFKSRMVMGGQRRMQDTQPDSPLRLLACIHTKRDAKVIIDLLKASCPSVRTPIQVLAVELSKMTNRPASSLIIRDARKPSFTSKSLKKDSEDTLGCFDNLSQAIFAEKMRIISDYNSMHTDILNLARRRGVTLILSTFHKQPTYDGLGAGAATARAVNIINRDHARKDEKKVVSENLVRDASCCVAIFVDRGVNHKRSKELRVAMFYVAGADDREALSYAWRMTRSSEVNLTLVRLVWENPNDEFDEADKEFIKGFKQQMGDSPRVRYLEKVVRDERETVKLLDKIGNKGFDLYVLGRGHGRKMSLAQTVDPVLEEPVLGPLGDALTDLNSAAKTSILIFQRQVEHVEGSVRSTSSAYEKVFDGMVEQKLMCPPPRSPVILSQFD 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03697 828 Gene3D - 45 450 IPR038770 -
Spst1g03697 828 PANTHER CATION/H + ANTIPORTER 32 787 - -
Spst1g03697 828 Pfam Sodium/hydrogen exchanger family 54 437 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03697 Spst-Chr1 46734784 46740037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03697 23 787 Antiporter Super Family AT2G13620 32.466 1.44e-127 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03697 K26731 - gmx:100780176 1245.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03697 1 46734784 46740037 Spst1g03697 1 46734784 46740037 ECH