Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03684 ATGTACAGCGGCGACAGCGATAGCTGCAGCGACATCGGTGACCAGGGGCAGCGCAGGGAGACCCTGGACTTCCGGAATGTGAAGGTGGTGTCGGCGGTGGGACGCGGCGCCAAGGGCGTCGTGTTCCTGGCGCGGGCGTACGGCTCCTGGGGCGAGGAGTGGGTAGCGCTGAAGGTGGTGTCCAAGGCGCTGCTGAGGAAGAAGAACAAAAACGAAGGAGGTTGCAAGAGGGTGTCGTTCGAGAGGCACATACTACGTCGTTTAGATCACCCGCTATTGCCCAGGTTCCGAGGCGCATTCGAAACCGACCAACTCACAGGCTTCCTCATCGATTATTGCCACGGCGGGAACCTGCATTCGCTCCGGAAGAAGCAACCGGAGAAGACCTTTTCCGAAAAAACCATAAGGTTTTATGCTGTAGAATTGGTTCTGGCATTGGAGTATTTGCACAATTTTGGAGTAGTGTACAGAGACTTAAAGCCGGAGAACATCATGATCCAAGAGTCAGGTCACATAATGTTGGTGGATTTCGACCTCTCCAAGAAGCTAAATCTTAAGTCAGCTTCTTCGAGTGGCAACTCGTCACCGGGTTCTGAGTCGCCACCAGAGAAGGATCGGAGGAGACGACGATTATCACGATTCAATTGTTATTGTCATTCAGGGATATCCTTGAATGACTTGGATATTCCGAGTCAACTTAATGCAACGCCAACACGTGGCAGCTTGTCGAACTCGGTGGAAAAGTCCAACTCATTTGTGGGAACAGAAGATTATGTGGCACCTGAGGTGATATTAGGAGAAGGACACGACTTTGGAGTTGATTGGTGGTCATTGGGTGTTGTTTTGTACGAGATGCTTTATGGGGTCACGCCGTTTAAAGGTGCGAATAGAAAAGAAACATTCCATCGTATCATAACTAAGGAGCCTGATTTAATAGGTGGAACAACGCAATTGAGGGACTTGATTAAAAAGCTGCTTGAAAAGGATCCTAATCATAGGATCGAGGTGATTGAGATCAAGAACCATGGTTTCTTTAAAGGTGTAAAGTGGGACACAATCTTACAAATTTCACGTCCACCTTATATTCCCCATAACGAAATCAAAGATACATCAGGATTTTCAAAAAAAGAAGTAGAGTCATTCGTTCATGGGATATTTTTTCCAAAGAGTAAAGATGAGGAAGATAAAACTAAGAAAGGAGACACAAAAGAGAATGAAAATCAAACGCAGAAGGAAGACACTAACAAAAAAGTGTGGGTTGATAAGTTGAATCAAGATCCTGTTAAAGAAGAAAATTTTTTAATTTTTTGA 1311 0.4577 MYSGDSDSCSDIGDQGQRRETLDFRNVKVVSAVGRGAKGVVFLARAYGSWGEEWVALKVVSKALLRKKNKNEGGCKRVSFERHILRRLDHPLLPRFRGAFETDQLTGFLIDYCHGGNLHSLRKKQPEKTFSEKTIRFYAVELVLALEYLHNFGVVYRDLKPENIMIQESGHIMLVDFDLSKKLNLKSASSSGNSSPGSESPPEKDRRRRRLSRFNCYCHSGISLNDLDIPSQLNATPTRGSLSNSVEKSNSFVGTEDYVAPEVILGEGHDFGVDWWSLGVVLYEMLYGVTPFKGANRKETFHRIITKEPDLIGGTTQLRDLIKKLLEKDPNHRIEVIEIKNHGFFKGVKWDTILQISRPPYIPHNEIKDTSGFSKKEVESFVHGIFFPKSKDEEDKTKKGDTKENENQTQKEDTNKKVWVDKLNQDPVKEENFLIF 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03684 436 Pfam Protein kinase domain 29 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g03684 436 Pfam Protein kinase domain 242 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g03684 436 MobiDBLite consensus disorder prediction 391 418 - -
Spst1g03684 436 ProSiteProfiles AGC-kinase C-terminal domain profile. 346 436 IPR000961 GO:0004674|GO:0005524|GO:0006468
Spst1g03684 436 SMART serkin_6 27 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g03684 436 Gene3D Transferase(Phosphotransferase) domain 1 117 188 - -
Spst1g03684 436 PANTHER FLIPPASE KINASE 1-RELATED 18 371 - -
Spst1g03684 436 FunFam Serine/threonine-protein kinase OXI1 117 185 - -
Spst1g03684 436 SUPERFAMILY Protein kinase-like (PK-like) 28 371 IPR011009 -
Spst1g03684 436 MobiDBLite consensus disorder prediction 187 207 - -
Spst1g03684 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Spst1g03684 436 FunFam Serine/threonine-protein kinase OXI1 247 364 - -
Spst1g03684 436 Gene3D Phosphorylase Kinase; domain 1 28 116 - -
Spst1g03684 436 Gene3D Phosphorylase Kinase; domain 1 365 376 - -
Spst1g03684 436 Gene3D Transferase(Phosphotransferase) domain 1 246 364 - -
Spst1g03684 436 ProSiteProfiles Protein kinase domain profile. 27 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03684 Spst-Chr1 46566859 46569004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03684 13 436 AGC Kinase Gene Family AT3G25250 51.501 7.73e-142 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst1g03684 Pkinase 1.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03684 K20714 - gmx:100813693 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03684 1 46566859 46569004 Spst1g03684 1 46566859 46569004 ECH