Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03654 ATGGTTACCATCCACAGCTCCGTCGTTGTTCTCCCCTCTGAGGTCACGCCATCTTCAAACCTCTCACTCTCCCTTTGCGACCAAATCAAGCTTCCCAACCACGGATCTGAGCTCTATATCTACGCCAACACACGCATCACCGATGATTCATCATTCGCTTCTATGATCCACACTCTCTCAACCTCTCTCAGCAAAACCCTCTCTCTCTTCCACCCCTTCGCCGGTAGCTTGAGCCGGATCCACGGTGGCCGCTTCCAGCTTCTCTGCAACGCCAAAGGGGCAGTCCTCGTAGCAGCCTCATGCTACACTGAACTAAGTTTTGAAGATTTGTTCGAGTTCGCTCCCACCTACGCTGTCCCGAAGATCAACTACGATGTCCCGATTGAGGAAGTTCCCTTGCTGGTGGCGCAGGTCACGAGGTTCCCGTGTGGTTTCGTCACACTTGGACTTGCTCTGTGTCGCGCTATCGTCGACGGAACTTCAGTTTCGGGTTTCGTTAATTCCTGGGCCAAACTCGCCAGAGGAGAGAGTTTAGATTCTGGTTTGATTCCTTTGCTTGGTCGAACGAAACTAGATTCGTTCAAACTGAATAAGCCACCGCGGTTTGGACACCCCGAGTTTCTACCACCACCCAGTTGGACACAACGTGATGAGTTGATGCAGCAAGAACTTGGTACGGCCATGTTGGTAATCACAAAAGGACAGGTTCGTAAACTGAAGTATAAAGCGTGCGACTTTGGAAGTGGGTACGGTAAGGGTCCCATACGAGGTTATACTAGCTTTGAGGTCCTAAGTGGTCACTTGTGGAGGTGTGTTTGCAAGGTGCGTTATTCAGGTGATATGCGTCAACCAACGAGGTTGACCACTTTGGTTAATTGTAGAAACCGTTTGAGACCATCTCTCCCCACTGCTTATTTTGGCAATGCAACGTTTCCTACTGTGACAGAAACTTGTTCCTTTGATGACATTATGCAGAAACCTCTTGGCTATGCTGTGGGGAAAGTGAGGGAAGCGATTGAGAGAATGCGTGATGAGTATGTGAGGTCTGCTCTTGATTATATAGCATGTGTGGAGGACATGGATTTGTTCAGGGACACGTTTTACAACTCCGGTGGGAAAGATAAGGAAGACCCTAATTTGTATGTCGTTGGTTGGACCAATTTTGCTTCTTTTGCAACGGATTTCGGATGGGGGAAACCGGTTTGTTTGCTTCCCGGGAATATTAAATCTAATGGTAAGGCTTTCATTTTGGACACTGCAAGTGGTGATGGGTTCGTTGTAGCTGTTTGTTTGCAGGCATCGTACATAGATGCGTTGAAGAAGCTATTCTATGACGATATAGAGAAACATGCTTCTAAATTGTGA 1365 0.4791 MVTIHSSVVVLPSEVTPSSNLSLSLCDQIKLPNHGSELYIYANTRITDDSSFASMIHTLSTSLSKTLSLFHPFAGSLSRIHGGRFQLLCNAKGAVLVAASCYTELSFEDLFEFAPTYAVPKINYDVPIEEVPLLVAQVTRFPCGFVTLGLALCRAIVDGTSVSGFVNSWAKLARGESLDSGLIPLLGRTKLDSFKLNKPPRFGHPEFLPPPSWTQRDELMQQELGTAMLVITKGQVRKLKYKACDFGSGYGKGPIRGYTSFEVLSGHLWRCVCKVRYSGDMRQPTRLTTLVNCRNRLRPSLPTAYFGNATFPTVTETCSFDDIMQKPLGYAVGKVREAIERMRDEYVRSALDYIACVEDMDLFRDTFYNSGGKDKEDPNLYVVGWTNFASFATDFGWGKPVCLLPGNIKSNGKAFILDTASGDGFVVAVCLQASYIDALKKLFYDDIEKHASKL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03654 454 Gene3D - 1 209 IPR023213 -
Spst1g03654 454 Pfam Transferase family 1 444 - -
Spst1g03654 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 433 - -
Spst1g03654 454 Gene3D - 212 445 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03654 Spst-Chr1 46209860 46211224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03654 2 445 Monolignol Biosynthesis Gene Families AT5G48930 33.846 2.68e-72 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03654 K13065 - gmx:100819383 664.84