Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03651 ATGCCGGAAGAAACAACGTCGATCGACTACGTCATGGAGGCCGCATCTGGGGCCCACTTCTCCGGCCTGAGACTCGACGGTCTGCTACCTTCCTCTGCCACTGCTTCCGCCACTCCCGATTCAACCCTAGCCTCCGATTCCATCCCCAATCAGCCTTTCGTTATAGGAGTTTCCGGAGGTACTGCCTCCGGGAAAACCACCGTGTGCGACATGATCATTCAGCAGCTTCACGATCACCGGGTCGACTCGTTTTATCGTGGACTGAGACCTGAAGAGTTGGAACATGTTCATGAATATAATTTCGATCACCCTGAGGCTTTTGACACTGAGCAGTTGTTAGAGTGCATGGGGAAACTCATCAGTGGCCAGGGCGTGCATGTTCCCATTTATGACTTCAAGAAGCATCAACGTTCTTCTGATAGTTTTCGCCAGGTCAATGCATCCGATGTGATTATATTAGAGGGGATTCTTGTATTCCATGATCAGCGTGTGCGGGATCTGATGAACATGAAGATCTTTGTAGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTAGACGTGACACAGTGGAGAGGGGCAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAATTTGTTAAGCCTGCATTTGATGATTTTGTTCTACCATCAAAAAAGTATGCTGATGTGATCATTCCACGTGGAGGTGATAATCATGTTGCCATAGATTTGATTGTGCAACATATCCGTACAAAGCTTGGTCAACATGATCTATGCAAAATATATCCAAATGTCTATGTTATTCAGTCTACATTTCAGGTATCTTCAAACATAGCTTGTCATTTGACAGCAAACGACAGTGATTGGATTGTGAGGGTGAGTGAGATCCCAGGCTCTCATAATTCTAAGAGAACACTTGTATTCATTCCTTTCCACTCTGCTGTGAAAACACTAGAGGTTGAGAAGCTATCACAGACTGTAAAGGCTCTAAGAGAGCGTATTTTCAGTAGATGGCTTAGGTGTAAGCCTAGAGGCCAATATAGACTTATACGCCTGGTTGTTGAGCATGGTCTAGGTCATCTGCCTTTCACCGAAAAGCAAGTGGTTACTCCCACAGGATCTGTCTATACTGGTGTTGATTTCTGCAAAAAGTTGTGTGGTGTTTCTATTGTTCGAAGTGGTGAGAGCATGGAAAATGCGCTTCGTGCATGTTGTAAAGGCATTAAAATTGGTAAAATTCTTATTCACCGGGATGGAGACAACGGTAAACAGCTTATATATGAAAAGCTTCCCAAGGATATTTCAGAACGGCATGTATTGCTTCTTGACCCTGTCCTGGCCACAGGTAACTCTGCAAACCAAGCAATTGAGCTACTCATTCAGAAAGGAGTACCAGAAAACCACATTATATTCCTAAATCTCATTTCTGCTCCTGAGGGAATCCACTGCGTGTGTAAAAGGTTTCCATCATTGAAGATTGTTACATCCGAGATAGATGTTGAATTAAATGAAGAGTACCGTGTTATCCCAGGATTAGGCGAATTTGGTGATCGCTACTTTGGCACCGATGATTGA 1560 0.441 MPEETTSIDYVMEAASGAHFSGLRLDGLLPSSATASATPDSTLASDSIPNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVDSFYRGLRPEELEHVHEYNFDHPEAFDTEQLLECMGKLISGQGVHVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQVSSNIACHLTANDSDWIVRVSEIPGSHNSKRTLVFIPFHSAVKTLEVEKLSQTVKALRERIFSRWLRCKPRGQYRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPENHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVELNEEYRVIPGLGEFGDRYFGTDD 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03651 519 Gene3D - 339 517 IPR029057 -
Spst1g03651 519 Gene3D - 50 261 IPR027417 -
Spst1g03651 519 FunFam Uridine kinase 49 250 - -
Spst1g03651 519 CDD PRTases_typeI 375 490 IPR000836 -
Spst1g03651 519 SUPERFAMILY PRTase-like 343 518 IPR029057 -
Spst1g03651 519 CDD UMPK 54 247 IPR000764 -
Spst1g03651 519 PRINTS Uridine kinase signature 179 189 - -
Spst1g03651 519 PRINTS Uridine kinase signature 215 228 - -
Spst1g03651 519 PRINTS Uridine kinase signature 122 137 - -
Spst1g03651 519 PRINTS Uridine kinase signature 193 204 - -
Spst1g03651 519 PRINTS Uridine kinase signature 52 69 - -
Spst1g03651 519 Pfam Uracil phosphoribosyltransferase 343 517 - -
Spst1g03651 519 FunFam Probable uracil phosphoribosyltransferase 309 517 - -
Spst1g03651 519 PANTHER URIDINE KINASE 42 428 - -
Spst1g03651 519 Pfam Phosphoribulokinase / Uridine kinase family 54 235 IPR006083 GO:0005524|GO:0016301
Spst1g03651 519 NCBIfam uridine kinase 52 247 IPR000764 -
Spst1g03651 519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 240 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03651 Spst-Chr1 46121626 46129362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03651 1 519 PRT Gene Family AT3G27190 72.542 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03651 K00876 - gmx:100780005 817.379