Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03647 ATGGAAGGAGGTTTGGTGAACAACGTTGGTTATGTGAAAAGGGGCATTGCCAAGAAGAAGAAACAGCCTCATCGCAGGGTTAAGAGGCCAGTTTCAAAGACTCTTCAGCAACTATTTCATTCATGCAAAGAAACTTTCAAAGGTCCTGACACTGTTCCTTCACCACAAGATGTTCAGAGACTACGCCACCTACTTGGTGATTATAATAACATGAAACCAGAAGACGTTGGGTTAAGTGAAGATCTGCAGTTCTTTAAGCCTGGAAATATAGTTAAGGAGAACCAAAGGGTCACCTACACAACTGTGTGCAAGTGTGACAATTTTTCACTCTGCATCTTTTTCATACCGGAAGGAGGAGTCATTCCTCTCCATAACCACCCGGGCATGACTGTTTTCAGCAAACTTCTGTTAGGACTAATGCACATTAAGTCCTATGATTGGGTTGATTCGGAGGTCTCTGATGACAACCTGCTGCAACCACCATCATCTCAAGTGAGATTGGCAAAGTTGAAAACTGATAAGGTGCTCACATCATCATGTAACACTTCTGTGCTGTATCCAACTACAGGAGGCAATATCCATGAATTCACAGCCATAACCCCATGTGCTGTTCTTGATGTCATTGGTCCTCCTTATTCCAAAGAAGATGGTCGGGACTGTTCCTACTACAAAGATCATCCTCATGTTTCTTTTTCTAATGAAAAGATTGGCGAGACTAAAGAGGAAAATGATAACGATAGGTTCGCATGGTTACAAGAGATCGACATGCCAGAGAACTCTGAAATGGATGGCATGGAGTACCTGGACACATTCAAGAAAATGGCAAAACAAAATAAGGAATGGGCTGTAGGAATCGACCTTGGCACAACATACTCGTGTGTTGCAGTATGGCAGGAACAGCATCAGAGAGTAGAGATCATTCACAATGACCAAGGCAACAACACCACTCCTTCTTGTGTTGCTTTCACAGACCATGAAAGGTTGATAGGAGATGCTGCTAAAAATCAGGCTGCTACCAATCCAGAGAACACCATCTTCGATGCTAAGAGGTTAATCGGTAGGAAATACGGTGACGCAATTATTCAGAAGGATAAATTGTTGTGGCCATTTAAGGTTGTTGCCGGGGCTAATGACAAACCTATGATTTGTGTCAAGTATAAGGGGCAGGAGAAGCACCTTTGTGCGGAGGAAGTATCATCCATGGTCCTTACAAAGATGCGGGACATTGCAGAGGCATACCTGGAAACACCAGTAAAGAATGCAGTTGTTACTGTGCCTGCTTATTTCAATGATTCTCAGCGCAAAGCCACCATTGATGCTGGTGCTATTATCGGCCTCAAAGTTATTCGAATAATCAACGAACCCACCGCTGCGGCAATTGCATATGGCCTTGATAAGAGAAATGATTGTGTCGGAGAGCGAAATATTTTTATCTTTGATTTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTACAATTAAGGACAAGGTCTTCCAAGTCAAGGCTACTGCAGGAAACACTTATCTTGGTGGAGAGGATATTGATAACAGAATGGTGAACTACTTTGCGGAGGAAATGAAAAGAAAAAATAAAATGGACGTAAGTGGGAACCCGAGAGCCCTGAGGAGGTTGAGAAGTGCATGCGAGAGAGCAAAAAGGACACTTTCATATGCCGTTACTGCTACCATTGAGGTAGATGGTTTATTTCAGGGCATTGATTTGTGTTCTTCAATCAGTCGTGCAAAGTTTGAAGAAATGAATATGGATCTTTTTGAAGAGTGTATGGAGACAGTGGAAAGGTGTCTCACTGACTCTAAGATGGATAAGAGCAGTGTAGACGATGTTGTCCTTGTTGGTGGCTCTTCTAGGATACCCAAAGTGCAACAACTATTGCAGGACTTTTTCAAGGGAAAGAATCTTTGCAAGAGCATTAATCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTGCAGGCTGCTTTGTTGAGTGAAGGCATTAAGAATGTCCCGGATTTGGTATTGAAGGACGTTACACCGCTTTCACTTGGTGTATCAGTAAGAATAACAGATATCATGAGTGTTGTGATTCCTAGGAACACTACTATTCCTGTAATTAAGAAAGAAAAATATGAGACATCCAGAGATAACCAAACATCTGTCCTGATTAAGGTTTATGAGGGCGAGAGAGCAAGGGCCAGTGACAATAATTTGCTGGGCTTTTTTACACTTTCTGGTTTTCCTCTTTTTCCCCGCGGGCATCCCTTGTTAGTGACCTTTTCCATAGATGAAAATGGCATACTTTCTGTTTCTGCTGAGGAAGAAACAACCGGTAATAGGAATGAAATTACTATAAAGAACGACAAAGGAAGACTGTCAGCTGCGCAAATTAGTACTATGATGCAAGAAGCTGAGAACTACAAGTCTGAAGATAACAAGTTTCTTAGGAAGGCCAATGCAATTAATGATTTGGATTCTTATGTATACAAGGTCAAAAACGCTTTAAAGAGAGAAGATATCAGCTCAAAGTTTAGCTCGGGAGAAGAGATGGATATAAGCTGTTCAATTGCTAGAGCCATTGATATGGTTGATGGTGTGAACCAGATTGAAGATATAGTTGTTTTGGAAGACTGTGTGAATGAGCTTAAAGCAATCTTTGAAAGGGTTGCGGTCATGGGCAAGTTTGTGAAGGAGATTGAAGGCTTAAGAAATGCATCAATGACTAATTTTGCAGATGTGAAAAGGTTAATCGGCAGAAGGTTTAGCGATCCCATTATTCAGGATGATCTGAAGTTGTGGCCATTTAAGGTCATTGCTGATTCTGATGACAAACCCATGATAGTTGTTTCATACAAGGGTCTGGAGAAACATATTTCAGCTGAAGAAATCTCATCTATGATCCTTACAAAGATGCGCGAGATTGCAGAAGCCTATTTGGAATCACAGGTTAAGAATGTCGTGGTTATTGTACCTGCTTATTTTAATGACTCTCACGACAAGCAACCAAAGATGCTGCCCACAGCTGCAGCTCTAGCATACGGCCTTGACAAAAGACCTAGTTGTGTTGAAGAGCGGACTATTTTCATCTTTGATCTTGGTGGTGGTACATTTGATGTGTCTCTTCTCACAATCAAGGGTGATGTCTTTGAAGTCAAGGCCACTGCTGGTGACACTCACCTTGGAGGAGAGGACTTGGATAACAGAATGGTGAAGTACTTTGTTGAGGAGTTCAAGAGGAAGAATAAAGTGGACATAAGTAGGAATCCAAGAGCATTGAGGAGATTGAGAACTGCTTGTGAGAGAGCAAAAAGGACACTCTCATATGCTGTTGACACCACCATTGAGGTAGATGCTTAG 3351 0.4199 MEGGLVNNVGYVKRGIAKKKKQPHRRVKRPVSKTLQQLFHSCKETFKGPDTVPSPQDVQRLRHLLGDYNNMKPEDVGLSEDLQFFKPGNIVKENQRVTYTTVCKCDNFSLCIFFIPEGGVIPLHNHPGMTVFSKLLLGLMHIKSYDWVDSEVSDDNLLQPPSSQVRLAKLKTDKVLTSSCNTSVLYPTTGGNIHEFTAITPCAVLDVIGPPYSKEDGRDCSYYKDHPHVSFSNEKIGETKEENDNDRFAWLQEIDMPENSEMDGMEYLDTFKKMAKQNKEWAVGIDLGTTYSCVAVWQEQHQRVEIIHNDQGNNTTPSCVAFTDHERLIGDAAKNQAATNPENTIFDAKRLIGRKYGDAIIQKDKLLWPFKVVAGANDKPMICVKYKGQEKHLCAEEVSSMVLTKMRDIAEAYLETPVKNAVVTVPAYFNDSQRKATIDAGAIIGLKVIRIINEPTAAAIAYGLDKRNDCVGERNIFIFDFGGGTFDVSLLTIKDKVFQVKATAGNTYLGGEDIDNRMVNYFAEEMKRKNKMDVSGNPRALRRLRSACERAKRTLSYAVTATIEVDGLFQGIDLCSSISRAKFEEMNMDLFEECMETVERCLTDSKMDKSSVDDVVLVGGSSRIPKVQQLLQDFFKGKNLCKSINPDEAVAYGAAVQAALLSEGIKNVPDLVLKDVTPLSLGVSVRITDIMSVVIPRNTTIPVIKKEKYETSRDNQTSVLIKVYEGERARASDNNLLGFFTLSGFPLFPRGHPLLVTFSIDENGILSVSAEEETTGNRNEITIKNDKGRLSAAQISTMMQEAENYKSEDNKFLRKANAINDLDSYVYKVKNALKREDISSKFSSGEEMDISCSIARAIDMVDGVNQIEDIVVLEDCVNELKAIFERVAVMGKFVKEIEGLRNASMTNFADVKRLIGRRFSDPIIQDDLKLWPFKVIADSDDKPMIVVSYKGLEKHISAEEISSMILTKMREIAEAYLESQVKNVVVIVPAYFNDSHDKQPKMLPTAAALAYGLDKRPSCVEERTIFIFDLGGGTFDVSLLTIKGDVFEVKATAGDTHLGGEDLDNRMVKYFVEEFKRKNKVDISRNPRALRRLRTACERAKRTLSYAVDTTIEVDA 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03647 1116 FunFam heat shock 70 kDa protein-like 909 964 - -
Spst1g03647 1116 FunFam Heat shock 70 kDa 510 593 - -
Spst1g03647 1116 Gene3D Actin; Chain A, domain 4 510 593 - -
Spst1g03647 1116 SUPERFAMILY Actin-like ATPase domain 281 466 IPR043129 -
Spst1g03647 1116 Gene3D - 882 1055 - -
Spst1g03647 1116 FunFam heat shock 70 kDa protein-like 894 1026 - -
Spst1g03647 1116 FunFam heat shock 70 kDa protein 14 1059 1116 - -
Spst1g03647 1116 ProSitePatterns Heat shock hsp70 proteins family signature 2. 1027 1040 IPR018181 -
Spst1g03647 1116 Gene3D - 346 401 - -
Spst1g03647 1116 SUPERFAMILY RmlC-like cupins 32 228 IPR011051 -
Spst1g03647 1116 FunFam Heat shock 70 kDa protein 664 819 - -
Spst1g03647 1116 SUPERFAMILY Actin-like ATPase domain 473 662 IPR043129 -
Spst1g03647 1116 SUPERFAMILY Actin-like ATPase domain 1022 1115 IPR043129 -
Spst1g03647 1116 SUPERFAMILY Actin-like ATPase domain 907 1015 IPR043129 -
Spst1g03647 1116 ProSitePatterns Heat shock hsp70 proteins family signature 3. 615 629 IPR018181 -
Spst1g03647 1116 Gene3D - 467 641 - -
Spst1g03647 1116 FunFam Heat shock protein 70 283 474 - -
Spst1g03647 1116 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 667 822 IPR029047 -
Spst1g03647 1116 ProSitePatterns Heat shock hsp70 proteins family signature 2. 478 491 IPR018181 -
Spst1g03647 1116 Gene3D Jelly Rolls 26 244 IPR014710 -
Spst1g03647 1116 Pfam Hsp70 protein 904 1114 IPR013126 GO:0005524|GO:0140662
Spst1g03647 1116 Pfam Hsp70 protein 282 883 IPR013126 GO:0005524|GO:0140662
Spst1g03647 1116 PANTHER HEAT SHOCK PROTEIN 70KDA 282 837 IPR013126 GO:0005524|GO:0140662
Spst1g03647 1116 ProSitePatterns Heat shock hsp70 proteins family signature 1. 285 292 IPR018181 -
Spst1g03647 1116 Gene3D - 283 659 - -
Spst1g03647 1116 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 818 887 IPR029048 -
Spst1g03647 1116 Gene3D Actin; Chain A, domain 4 1059 1116 - -
Spst1g03647 1116 FunFam heat shock 70 kDa protein-like 346 401 - -
Spst1g03647 1116 CDD cupin_ADO 106 213 - -
Spst1g03647 1116 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 661 841 IPR029047 -
Spst1g03647 1116 Pfam PCO_ADO 69 267 IPR012864 GO:0016702
Spst1g03647 1116 PRINTS 70kDa heat shock protein signature 484 494 - -
Spst1g03647 1116 PRINTS 70kDa heat shock protein signature 421 441 - -
Spst1g03647 1116 PRINTS 70kDa heat shock protein signature 751 767 - -
Spst1g03647 1116 PRINTS 70kDa heat shock protein signature 281 294 - -
Spst1g03647 1116 PRINTS 70kDa heat shock protein signature 612 628 - -
Spst1g03647 1116 PRINTS 70kDa heat shock protein signature 644 664 - -
Spst1g03647 1116 PRINTS 70kDa heat shock protein signature 311 323 - -
Spst1g03647 1116 PRINTS 70kDa heat shock protein signature 333 341 - -
Spst1g03647 1116 PRINTS 70kDa heat shock protein signature 670 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03647 Spst-Chr1 46092533 46107819 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03647 274 883 Calmodulin-binding Proteins AT3G12580 66.013 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03647 K03283 - hbr:110636145 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03647 1 46092533 46107819 Spst1g03647 1 46092533 46107819 ECH