Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03646 ATGGAGAAGAGTGATGTAGATGATGTTGTACTCGTTGGTGGTTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCGAGACTTCTTCACGGGGAAGGAACTGTGCTTGAGCATCAACCCTGACGAGGCTGTTGCTTATGGAGCTTGCAAAGGAAGGGTTCTTGGTGAATCTTGGATGGTTCTTGGAGGTTATAAGGTTGAAGCAGCTTTTACAAGTTATAGTTCTAGGTTCCTGGTGAATCTTGCTATGTCTTAG 255 0.451 MEKSDVDDVVLVGGSSRIPKVQQLLRDFFTGKELCLSINPDEAVAYGACKGRVLGESWMVLGGYKVEAAFTSYSSRFLVNLAMS 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03646 84 ProSitePatterns Heat shock hsp70 proteins family signature 3. 9 23 IPR018181 -
Spst1g03646 84 Gene3D - 1 35 - -
Spst1g03646 84 Pfam Hsp70 protein 1 49 IPR013126 GO:0005524|GO:0140662
Spst1g03646 84 SUPERFAMILY Actin-like ATPase domain 2 49 IPR043129 -
Spst1g03646 84 Gene3D - 36 49 - -
Spst1g03646 84 PRINTS 70kDa heat shock protein signature 6 22 - -
Spst1g03646 84 PRINTS 70kDa heat shock protein signature 38 58 - -
Spst1g03646 84 PANTHER HEAT SHOCK PROTEIN 70KDA 1 54 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03646 Spst-Chr1 46091044 46092412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03646 1 48 Calmodulin-binding Proteins AT3G12580 85.417 9.65e-23 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03646 K03283 - vum:124829379 83.1889