Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03644 ATGCTGAGAAAAGAAAAGCTGGCCCTTGAGAAATGGTTTCCAGGCTTTGCTAGGATTTGGAGACTCACTGGTTTATGGTTGAAAAAGTTTTGGATTTTGTTCAATTGGGTGGCCTGTGCAACTTCTGAAGGAATAAATCTGGTGAAGCTTTTTCTCTATGTTGAGTTATGTCTAAAATTCTCACAAGTGGTTATACTTTATGGAATTTGCAATATCACCAAAACTCTTTCATCAGTGCATGAGTTGGTTCTAATGGCAAATAGACACCATTCCTCAGTGTTTTTGGTGTTGGTTACTATTTTACTTTCTATCCCTTACTCAGAGCAATTACAATCTTCTCACTCTCAGACTCTTCTCAGAATTCAGCAGCTATTGAACTTTCCTGCTGCTTTGAGCAACTGGAATAACGACACAGATTTTTGCAACACAGATTCAAACTCTTCCCTCACCATTGTGTGCTACGAAGACTCCATAACACAGCTTCACATAATAGGGGAAAGAAGAGATTCACCACTCCCTAGAAATTTCTCAATAAATTCCTTTGTCACAACACTAGTAAGGCTTCCCAGTTTGAAAGTCCTCACATTGGTTTCTCTGGGTATTTGGGGTCCTTTGCCTGATAAGATAGCACGTTTGTCATCTCTGGAAATAGTTAACATGAGTTCCAATTTTCTCTATGGTTCCATTCCTCAGGAACTGTCATCACTGAAAAATCTCCAAACACTCATTTTTGACAACAACATGCTGGCTGAAACATTTCCTCCTTGGCTTGATTCAATTCCAACCTTAACTGTGCTAAGTTTGAAGAATAATTTGTTCAATGGGTCTCTACCGAATTCCCTTGGTAATGTGGAGAATTTAAGAACTCTTTCACTTTCTCATAATCACTTTTATGGGGTAGTGCCTGATTTGAGTCGTTTGACGAATCTTCAAGTGCTTGAATTGGATGATAATGCTTTTGGACCTCAGTTTCCCCAACTTGGTAACAAGTTGGTTACACTAGTGCTAAGAAACAATAGGTTCAGGGATGGTATTCCTACTGAATTGAGCTCATACTATCAACTTGAACGTTTGGATATATCGTCAAATGCATTTGTGGGGCCATTTCAGCCAGGATTGTTCTCACTTCCTTCTATTACTTATCTGAATATTTCTGGTAACAAATTAACTGGGATGCTTTTCGAGAATGTGTCTTGCAATTCAGAGCTTGATGTAGTGGATTTATCCTCAAATCTGTTGAGTGGGAGCTTACCTAAATGTTTAGTGTCAAATTCCAGTGATAGGACTTTCCTGTATGCTAGAAATTGTCTAGACACTGTGAATCAAAATCAGCAGCCGCAGCCTTTTTGCCACACTGAGGCTTTAGCTGTGGGAATATTACCTGAGATAAAGAGGCACAAACAAGTATCGAAGGTAGTTCTTTCCCTTGGTATAGTAGGTGGGACACTTGGAGGAGTAGCACTTGTTTTGCTAATTTTCTTTATTGTTAGAAGAGGAAATGCTAGAAGCAAAATGAAGAATCCTCCAACAAGATTAATATCAGAGAATGCTGCTTCTGGTTACACTTCTAAGTTGCTTTCTGATGCAAGATATATATCTCAAACAAAGAAGTTGGGAGCAGTTGGCTTGCCAACTTATCGAAGTTTCTCATTGGAAGAGATTGAGGCAGCTACAAACTACTTTCACACATCTTCTTTAATGGGTGAAGATTCTTATGGGAAGATGTACAGAGGTCAGCTGAAGAATGGTTCGGTTGTTGCTATTCGATGCGTAGAAATGAAAAAGAAATACAGCACTCAAAACTTTGTGAACCACATAGAGCTGATATCAAAACTAAGGCATCGTCATTTGGTCAGCGCTATTGGACACTGCTTTGAATGTTCTTTGGATGATTCAAGTGTCAACAAAGTATTTCTTGTCTTTGAATACGTACCAAACGGCACGCTCAGGAATTGGATATCTGATGAGAATGCTAGAAAATGCTTGAGTTGGACCCAACGCATTGGAGCTGCCATTGGAGTGGCAAAGGGAATCCAGTTTCTGCATACAGGGATTGTCCCTGGTGTATATTCCAACGATCTCAAGATAGAAGATGTTTTATTGGATCAGAATCTTGTGGCAAAAATCAGCAGTTATCACCTGCCTTTGTTATCTAACATGGGGAAGGTTCGACATGGAAATTCTTCAAGTGGATTAAAAAATTCTAGCAATAAGAAAAGTGTAAAGCATGAAGATAAGTCTGATATATACGACCTTGGAGTGATACTACTCGAACTCATTCTAGGAAGGAAAATAAAGACAGTGAATGATGCAGACGCTTTTAGGGATCTGTTGCAAGCAAGCTTAGGAGCTGATGAAGAGGGTAGGAGGAGTGTTGTTGATCCTGCAATTCGCAAGGCATGTTTGGATCAAGCATTGAAGACAATGATGGAGATATGTGTGAGGTGTCTGGTTAAGCAGCCAGAAGATAGGCCCTCTGTAGAGGATGTTTTGTGGAACTTGCAGTTTGCATCTCAAGTGCAGGATGCATGGAGAGGGGATTCACAAAGTAGTGAAGGGTCACCAGGCTCAGAATCTCGTGGACTTCCCTTTCATTAG 2598 0.3999 MLRKEKLALEKWFPGFARIWRLTGLWLKKFWILFNWVACATSEGINLVKLFLYVELCLKFSQVVILYGICNITKTLSSVHELVLMANRHHSSVFLVLVTILLSIPYSEQLQSSHSQTLLRIQQLLNFPAALSNWNNDTDFCNTDSNSSLTIVCYEDSITQLHIIGERRDSPLPRNFSINSFVTTLVRLPSLKVLTLVSLGIWGPLPDKIARLSSLEIVNMSSNFLYGSIPQELSSLKNLQTLIFDNNMLAETFPPWLDSIPTLTVLSLKNNLFNGSLPNSLGNVENLRTLSLSHNHFYGVVPDLSRLTNLQVLELDDNAFGPQFPQLGNKLVTLVLRNNRFRDGIPTELSSYYQLERLDISSNAFVGPFQPGLFSLPSITYLNISGNKLTGMLFENVSCNSELDVVDLSSNLLSGSLPKCLVSNSSDRTFLYARNCLDTVNQNQQPQPFCHTEALAVGILPEIKRHKQVSKVVLSLGIVGGTLGGVALVLLIFFIVRRGNARSKMKNPPTRLISENAASGYTSKLLSDARYISQTKKLGAVGLPTYRSFSLEEIEAATNYFHTSSLMGEDSYGKMYRGQLKNGSVVAIRCVEMKKKYSTQNFVNHIELISKLRHRHLVSAIGHCFECSLDDSSVNKVFLVFEYVPNGTLRNWISDENARKCLSWTQRIGAAIGVAKGIQFLHTGIVPGVYSNDLKIEDVLLDQNLVAKISSYHLPLLSNMGKVRHGNSSSGLKNSSNKKSVKHEDKSDIYDLGVILLELILGRKIKTVNDADAFRDLLQASLGADEEGRRSVVDPAIRKACLDQALKTMMEICVRCLVKQPEDRPSVEDVLWNLQFASQVQDAWRGDSQSSEGSPGSESRGLPFH 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03644 865 Gene3D Ribonuclease Inhibitor 111 327 IPR032675 -
Spst1g03644 865 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 534 643 - -
Spst1g03644 865 Pfam Protein tyrosine and serine/threonine kinase 564 831 IPR001245 GO:0004672|GO:0006468
Spst1g03644 865 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 111 328 - -
Spst1g03644 865 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase isoform A 329 446 - -
Spst1g03644 865 SUPERFAMILY L domain-like 134 437 - -
Spst1g03644 865 ProSiteProfiles Leucine-rich repeat profile. 286 308 IPR001611 GO:0005515
Spst1g03644 865 SUPERFAMILY Protein kinase-like (PK-like) 543 838 IPR011009 -
Spst1g03644 865 Gene3D Phosphorylase Kinase; domain 1 532 643 - -
Spst1g03644 865 PANTHER UNNAMED PRODUCT 179 764 - -
Spst1g03644 865 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 644 850 - -
Spst1g03644 865 ProSiteProfiles Protein kinase domain profile. 561 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g03644 865 Gene3D Ribonuclease Inhibitor 328 445 IPR032675 -
Spst1g03644 865 MobiDBLite consensus disorder prediction 844 865 - -
Spst1g03644 865 Gene3D Transferase(Phosphotransferase) domain 1 644 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03644 Spst-Chr1 46042409 46047856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03644 127 863 Miscellaneous Gene Families AT3G03770 61.456 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Spst1g03644 PK_Tyr_Ser-Thr 7.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03644 - - gmx:100807539 1379.39